Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc23G400 Aethionema arabicum HOM05D008865 ORTHO05D011106 2.4e-31 138.3 73 100.0
AT5G22970 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 1.4e-10 69.3 68 58.8
A03p10980 Brassica napus HOM05D008865 ORTHO05D011106 5.2e-10 67.4 73 57.5
A03p10990 Brassica napus HOM05D008865 ORTHO05D011106 5.2e-10 67.4 72 58.3
A03p11010 Brassica napus HOM05D008865 ORTHO05D011106 5.2e-10 67.4 72 58.3
BraA03t10409Z Brassica rapa HOM05D008865 ORTHO05D011106 5.2e-10 67.4 72 58.3
BraA03t10412Z Brassica rapa HOM05D008865 ORTHO05D011106 5.2e-10 67.4 72 58.3
BraA03t10413Z Brassica rapa HOM05D008865 ORTHO05D011106 5.2e-10 67.4 72 58.3
BraA03t10415Z Brassica rapa HOM05D008865 ORTHO05D011106 5.2e-10 67.4 72 58.3
BcaB01g04678 Brassica carinata HOM05D008865 ORTHO05D011106 6.8e-10 67.0 67 61.2
BcaB01g04681 Brassica carinata HOM05D008865 ORTHO05D011106 6.8e-10 67.0 67 61.2
AL6G34100 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 2.6e-09 65.1 58 58.6
BcaC01g06558 Brassica carinata HOM05D008865 ORTHO05D011106 2.2e-08 62.0 66 60.6
C03p12650 Brassica napus HOM05D008865 ORTHO05D011106 2.2e-08 62.0 66 60.6
C03p12670 Brassica napus HOM05D008865 ORTHO05D011106 2.2e-08 62.0 66 60.6
BolC3t13733H Brassica oleracea HOM05D008865 ORTHO05D011106 2.2e-08 62.0 66 60.6
BolC3t13736H Brassica oleracea HOM05D008865 ORTHO05D011106 2.2e-08 62.0 67 55.2
CARHR190570 Cardamine hirsuta HOM05D008865 ORTHO05D011106 4.9e-08 60.8 57 57.9
C03p12700 Brassica napus HOM05D008865 ORTHO05D011106 6.4e-08 60.5 67 55.2
Carub.0006s2074 Capsella rubella HOM05D008865 ORTHO05D011106 1.1e-07 59.7 56 57.1
BraA03t10408Z Brassica rapa HOM05D008865 ORTHO05D011106 1.4e-07 59.3 66 56.1
Thhalv10015539m.g Eutrema salsugineum HOM05D008865 ORTHO05D011106 3.2e-07 58.2 68 51.5
BcaC04g19616 Brassica carinata HOM05D008865 ORTHO05D011106 9.2e-07 56.6 66 54.5
C09p53610 Brassica napus HOM05D008865 ORTHO05D011106 9.2e-07 56.6 66 54.5
BolC9t58237H Brassica oleracea HOM05D008865 ORTHO05D011106 9.2e-07 56.6 66 54.5
AT5G60000 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 1.2e-06 56.2 66 53.0
BraA06t24016Z Brassica rapa HOM05D008865 ORTHO05D011106 2.0e-06 55.5 66 53.0
BraA10t43880Z Brassica rapa HOM05D008865 ORTHO05D011106 2.0e-06 55.5 66 53.0
Carub.0008s2070 Capsella rubella HOM05D008865 ORTHO05D011106 2.7e-06 55.1 66 53.0
A10p18060 Brassica napus HOM05D008865 ORTHO05D011106 3.5e-06 54.7 66 53.0
Aa31LG7G12520 Aethionema arabicum HOM05D008865 ORTHO05D011106 7.8e-06 53.5 69 49.3


User provided reference genes

Program Settings