Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.8e-195 686.8 722 100.0
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-148 531.2 717 76.2
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.7e-148 529.6 717 80.6
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.0e-147 526.2 709 85.5
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-142 511.1 721 81.8
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.7e-141 505.8 752 83.5
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.7e-141 505.8 752 83.5
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.4e-126 458.0 717 81.9
Aa31sc233G20 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-63 247.7 311 68.2
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.1e-63 246.1 186 71.5
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.1e-62 245.7 191 72.3
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.1e-62 245.7 191 72.3
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.8e-61 240.0 665 66.2
Aa31sc233G10 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.1e-58 231.5 191 68.6
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.6e-57 226.5 192 69.3
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.6e-57 226.5 192 69.3
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.5e-56 225.3 182 68.1
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 3.0e-41 174.5 155 60.0
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 6.7e-41 173.3 193 52.3
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 3.4e-37 161.0 126 65.9
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 1.4e-35 155.6 125 65.6
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 6.0e-34 150.2 144 54.9
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 7.9e-34 149.8 144 54.2
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 7.9e-34 149.8 144 54.2
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 2.3e-33 148.3 138 58.0
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 8.7e-33 146.4 144 52.8
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-31 141.4 192 51.6
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 5.3e-30 137.1 134 56.7
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 3.1e-22 111.3 159 40.3
Aa31LG6G11700 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.0e-21 108.6 99 55.6
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 2.0e-21 108.6 90 62.2
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 2.9e-20 104.8 160 43.1
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 3.8e-20 104.4 152 44.1
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 8.5e-20 103.2 159 42.8
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 1.9e-19 102.1 131 45.0
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 5.5e-19 100.5 164 38.4
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 7.2e-19 100.1 153 41.8
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 9.4e-19 99.8 141 41.8
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 1.6e-18 99.0 150 42.7
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 7.9e-18 96.7 137 42.3
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 1.0e-17 96.3 165 39.4
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 3.9e-17 94.4 171 38.0
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 5.1e-17 94.0 161 37.9
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 1.5e-16 92.4 173 34.7
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 1.5e-16 92.4 127 42.5
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 2.0e-16 92.0 101 42.6
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 2.5e-16 91.7 165 35.8
Aa31sc233G70 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.3e-16 91.3 65 72.3
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 3.3e-16 91.3 140 40.0
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 4.3e-16 90.9 136 38.2
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 1.3e-15 89.4 160 36.9
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 1.7e-15 89.0 151 37.1
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 2.8e-15 88.2 134 36.6
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 3.7e-15 87.8 157 37.6
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.7e-15 87.8 173 37.0
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 4.8e-15 87.4 157 37.6
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 4.8e-15 87.4 157 36.9
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 4.8e-15 87.4 173 37.6
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.4e-14 85.9 128 42.2
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 2.4e-14 85.1 105 45.7
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.1e-14 84.7 156 35.9
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.1e-14 84.7 149 36.9
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 4.1e-14 84.3 167 35.9
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 5.3e-14 84.0 157 36.3
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 6.9e-14 83.6 156 35.9
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 9.1e-14 83.2 156 35.3
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 9.1e-14 83.2 165 35.8
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 1.5e-13 82.4 137 36.5
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 1.5e-13 82.4 172 33.1
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 2.0e-13 82.0 138 35.5
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 3.4e-13 81.3 102 43.1
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 4.5e-13 80.9 138 35.5
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 5.9e-13 80.5 141 37.6
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 7.7e-13 80.1 138 35.5
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 1.3e-12 79.3 101 41.6
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 1.3e-12 79.3 138 34.8
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 2.2e-12 78.6 154 35.1
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 2.9e-12 78.2 157 31.2
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.0e-12 77.4 134 37.3
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 6.5e-12 77.0 135 37.8
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 3.2e-11 74.7 163 31.9
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 7.2e-11 73.6 89 42.7
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.6e-10 72.4 174 32.8
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 2.1e-10 72.0 177 31.6
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 2.7e-10 71.6 139 33.8
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 4.7e-10 70.9 73 47.9
BcaB07g33547 Brassica carinata HOM05D006694 ORTHO05D014504 6.1e-10 70.5 76 52.6
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 6.1e-10 70.5 101 34.7
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 3.0e-09 68.2 71 45.1
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 3.0e-09 68.2 128 31.2
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 3.3e-08 64.7 165 30.3
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 4.4e-08 64.3 127 31.5
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.7e-07 62.4 91 34.1
BcaC05g25242 Brassica carinata HOM05D006694 ORTHO05D008240 8.2e-07 60.1 85 64.7
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 8.2e-07 60.1 83 38.6
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.1e-06 59.7 87 36.8
SalBow3G0742 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.1e-06 59.7 97 30.9
SalBow3G2234 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.1e-06 59.7 94 30.9
SalBow3G3365 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.8e-06 58.9 93 30.1
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.4e-06 58.5 93 32.3
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 2.4e-06 58.5 71 45.1
C03p32380 Brassica napus HOM05D012099 ORTHO05D014504 3.1e-06 58.2 47 59.6
C07p23600 Brassica napus HOM05D012099 ORTHO05D014504 3.1e-06 58.2 47 59.6
SalBow3G0981 Salvia bowleyana HOM05D000162 ORTHO05D000090 3.1e-06 58.2 92 29.3
SalBow3G3814 Salvia bowleyana HOM05D000162 ORTHO05D000090 3.1e-06 58.2 93 29.0
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 4.1e-06 57.8 97 33.0
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 5.3e-06 57.4 102 30.4
SalBow3G1848 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.3e-06 57.4 94 29.8
SalBow3G3813 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.3e-06 57.4 94 29.8
SalBow3G4567 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.3e-06 57.4 94 29.8
Oeu010118.1 Olea europaea HOM05D000162 ORTHO05D000090 7.0e-06 57.0 93 30.1
SalBow3G0721 Salvia bowleyana HOM05D000162 ORTHO05D000090 9.1e-06 56.6 97 28.9


User provided reference genes

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