Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.7e-68 260.0 130 100.0
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.0e-65 252.3 130 96.9
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 1.6e-49 199.5 130 77.7
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 2.3e-48 195.7 130 76.2
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 2.9e-48 195.3 130 76.2
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 1.5e-47 193.0 130 75.4
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 1.5e-47 193.0 130 76.2
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.9e-47 192.6 130 74.6
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 2.1e-46 189.1 130 73.8
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 1.4e-45 186.4 130 71.5
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 1.8e-45 186.0 130 71.5
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 3.1e-45 185.3 130 71.5
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 3.1e-45 185.3 130 71.5
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 4.0e-45 184.9 130 71.5
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.5e-44 183.0 130 70.0
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 1.5e-44 183.0 130 67.7
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 1.3e-43 179.9 135 69.6
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 2.9e-43 178.7 138 68.1
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 2.9e-43 178.7 138 68.1
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 4.9e-43 177.9 138 68.8
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 2.4e-42 175.6 120 72.5
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 3.2e-42 175.3 135 69.6
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 5.4e-42 174.5 130 65.4
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.6e-41 172.9 133 63.9
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 2.7e-41 172.2 132 65.9
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 6.0e-41 171.0 137 62.8
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 6.0e-41 171.0 135 65.9
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 1.0e-40 170.2 130 65.4
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 1.3e-40 169.9 132 65.2
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 1.3e-40 169.9 136 64.7
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.7e-40 169.5 114 79.8
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 2.3e-40 169.1 130 62.3
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.3e-40 169.1 130 62.3
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 3.0e-40 168.7 126 65.1
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 5.0e-40 167.9 138 61.6
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 6.6e-40 167.5 128 68.8
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 8.6e-40 167.2 135 64.4
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 8.6e-40 167.2 131 64.1
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.1e-39 166.8 131 63.4
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.1e-39 166.8 131 64.1
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 1.1e-39 166.8 130 65.4
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.5e-39 166.4 132 63.6
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.9e-39 166.0 132 63.6
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 3.3e-39 165.2 130 66.9
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 4.3e-39 164.9 135 62.2
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 4.3e-39 164.9 135 62.2
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 4.3e-39 164.9 138 61.6
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 4.3e-39 164.9 136 62.5
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 7.3e-39 164.1 128 64.1
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.6e-38 162.9 130 63.8
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 2.8e-38 162.2 137 62.0
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 2.8e-38 162.2 121 68.6
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 3.6e-38 161.8 130 60.0
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 3.6e-38 161.8 130 61.5
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 6.2e-38 161.0 136 60.3
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.4e-37 159.8 131 61.8
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.8e-37 159.5 119 65.5
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.1e-37 158.7 131 61.1
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 3.1e-37 158.7 133 59.4
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 4.0e-37 158.3 139 59.7
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 4.0e-37 158.3 123 65.0
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 5.2e-37 157.9 128 60.2
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 6.8e-37 157.5 137 59.1
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 6.8e-37 157.5 130 60.0
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 6.8e-37 157.5 134 59.7
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 8.9e-37 157.1 133 61.7
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 1.5e-36 156.4 129 63.6
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.5e-36 156.4 132 59.1
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 2.6e-36 155.6 136 60.3
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 3.4e-36 155.2 132 59.1
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 5.8e-36 154.5 126 60.3
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 5.8e-36 154.5 130 58.5
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 7.5e-36 154.1 137 58.4
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 7.5e-36 154.1 136 58.1
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.5e-36 154.1 139 58.3
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.5e-36 154.1 139 58.3
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.7e-35 152.9 137 56.2
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.7e-35 152.9 137 56.2
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 2.2e-35 152.5 138 57.2
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.2e-35 152.5 133 57.1
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 4.9e-35 151.4 123 61.8
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 6.4e-35 151.0 139 55.4
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 8.3e-35 150.6 130 57.7
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 1.4e-34 149.8 119 63.9
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 1.9e-34 149.4 132 59.8
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 2.4e-34 149.1 127 55.9
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 4.1e-34 148.3 122 62.3
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 4.1e-34 148.3 134 57.5
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 5.4e-34 147.9 133 57.1
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 2.1e-33 146.0 129 58.1
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.7e-33 145.6 132 55.3
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 3.5e-33 145.2 146 55.5
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 3.5e-33 145.2 146 55.5
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 4.6e-33 144.8 136 55.1
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.6e-33 144.8 136 56.6
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.6e-33 144.8 136 56.6
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 8.6e-32 140.6 120 60.0
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 1.2e-30 136.7 131 54.2
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 2.8e-30 135.6 132 51.5
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.4e-29 133.3 121 54.5
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.4e-29 133.3 121 54.5
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 8.9e-29 130.6 124 54.8
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.5e-28 129.8 116 58.6
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.6e-28 129.0 116 58.6
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.7e-27 125.2 63 98.4
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 1.4e-26 123.2 133 51.9
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.9e-26 122.9 134 47.8
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.1e-26 121.7 131 47.3
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 1.0e-24 117.1 130 50.8
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.3e-24 116.7 117 52.1
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.1e-24 114.8 127 46.5
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.1e-24 114.8 127 46.5
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 1.9e-23 112.8 129 51.2
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 9.5e-23 110.5 133 48.9
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 2.2e-19 99.4 134 44.0
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 8.7e-16 87.4 114 46.5
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 1.5e-15 86.7 81 51.9
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 7.3e-15 84.3 124 42.7
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 1.3e-11 73.6 143 38.5
BcaC07g37383 Brassica carinata HOM05D005694 ORTHO05D031998 5.4e-10 68.2 66 54.5
BolC8t47687H Brassica oleracea HOM05D005694 ORTHO05D031998 5.4e-10 68.2 66 54.5
BolC8t47689H Brassica oleracea HOM05D005694 ORTHO05D031998 5.4e-10 68.2 66 54.5


User provided reference genes

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