Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 6.8e-44 180.3 90 100.0
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 7.8e-40 166.8 92 91.3
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 2.1e-37 158.7 82 96.3
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 2.1e-37 158.7 88 89.8
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 2.1e-37 158.7 88 89.8
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 2.1e-37 158.7 88 89.8
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 2.3e-36 155.2 82 93.9
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 2.3e-36 155.2 82 93.9
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 6.8e-36 153.7 90 87.8
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 8.9e-36 153.3 85 83.5
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 1.5e-35 152.5 81 93.8
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 1.5e-35 152.5 81 93.8
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 3.4e-35 151.4 80 93.8
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 4.9e-34 147.5 87 81.6
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 4.9e-34 147.5 81 88.9
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 2.4e-33 145.2 87 80.5
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 5.4e-33 144.1 89 78.7
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 9.2e-33 143.3 87 79.3
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 9.2e-33 143.3 89 76.4
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 2.1e-32 142.1 89 75.3
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 2.7e-32 141.7 88 73.9
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 3.5e-32 141.4 90 75.6
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.3e-31 139.4 89 74.2
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 1.3e-31 139.4 88 78.4
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 1.7e-31 139.0 88 78.4
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 5.1e-31 137.5 89 71.9
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 5.1e-31 137.5 88 73.9
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 5.1e-31 137.5 89 74.2
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 5.1e-31 137.5 89 74.2
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 5.1e-31 137.5 88 75.0
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 5.1e-31 137.5 89 78.7
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 6.6e-31 137.1 89 74.2
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 6.6e-31 137.1 89 74.2
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 6.6e-31 137.1 89 74.2
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 6.6e-31 137.1 80 82.5
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 8.6e-31 136.7 81 81.5
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 8.6e-31 136.7 87 73.6
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 8.6e-31 136.7 85 77.6
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 1.1e-30 136.3 89 71.9
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 1.1e-30 136.3 85 77.6
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 1.5e-30 136.0 86 74.4
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 1.5e-30 136.0 86 75.6
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.5e-30 136.0 86 75.6
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.5e-30 136.0 86 75.6
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.5e-30 136.0 86 75.6
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.5e-30 136.0 89 75.3
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 1.5e-30 136.0 86 75.6
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 1.9e-30 135.6 87 72.4
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 2.5e-30 135.2 87 73.6
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.5e-30 135.2 86 75.6
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 2.5e-30 135.2 85 77.6
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 2.5e-30 135.2 87 74.7
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 2.5e-30 135.2 85 76.5
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 3.3e-30 134.8 82 78.0
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 3.3e-30 134.8 89 76.4
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 3.3e-30 134.8 89 71.9
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 4.3e-30 134.4 91 74.7
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 4.3e-30 134.4 89 71.9
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 4.3e-30 134.4 79 79.7
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 4.3e-30 134.4 79 82.3
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 4.3e-30 134.4 82 79.3
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 5.6e-30 134.0 93 73.1
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 5.6e-30 134.0 91 73.6
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 5.6e-30 134.0 82 79.3
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 5.6e-30 134.0 86 74.4
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 7.3e-30 133.7 85 77.6
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 9.5e-30 133.3 81 77.8
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 9.5e-30 133.3 81 77.8
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 9.5e-30 133.3 81 77.8
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 9.5e-30 133.3 81 77.8
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 1.2e-29 132.9 84 75.0
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.2e-29 132.9 85 76.5
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 1.2e-29 132.9 82 75.6
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 1.6e-29 132.5 79 81.0
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 1.6e-29 132.5 81 76.5
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 1.6e-29 132.5 80 78.8
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 2.1e-29 132.1 82 76.8
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 2.1e-29 132.1 88 72.7
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 2.1e-29 132.1 82 75.6
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 2.1e-29 132.1 87 73.6
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 2.8e-29 131.7 85 74.1
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 2.8e-29 131.7 82 78.0
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 2.8e-29 131.7 89 69.7
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 3.6e-29 131.3 85 74.1
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 3.6e-29 131.3 87 72.4
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 3.6e-29 131.3 87 72.4
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 3.6e-29 131.3 81 76.5
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 3.6e-29 131.3 85 75.3
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 4.7e-29 131.0 89 74.2
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 4.7e-29 131.0 87 73.6
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 4.7e-29 131.0 87 73.6
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.7e-29 131.0 90 73.3
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 4.7e-29 131.0 89 70.8
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 6.2e-29 130.6 80 77.5
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 6.2e-29 130.6 103 67.0
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 8.1e-29 130.2 81 77.8
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 8.1e-29 130.2 90 70.0
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 1.4e-28 129.4 80 77.5
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 1.8e-28 129.0 80 78.8
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 2.3e-28 128.6 79 77.2
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 2.3e-28 128.6 80 76.2
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 6.8e-28 127.1 82 75.6
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 1.2e-27 126.3 93 69.9
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 7.5e-27 123.6 80 73.8
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 4.9e-26 120.9 104 63.5
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 6.4e-26 120.6 78 74.4
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 1.1e-25 119.8 117 54.7
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 1.4e-25 119.4 83 67.5
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.4e-25 119.4 78 71.8
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.9e-25 119.0 89 64.0
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 9.2e-25 116.7 78 70.5
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.2e-24 116.3 68 77.9
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 4.6e-24 114.4 78 71.8
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 8.1e-21 103.6 143 45.5
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 1.8e-20 102.4 132 45.5
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 6.8e-20 100.5 62 75.8
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 8.9e-20 100.1 64 76.6
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 2.1e-16 89.0 92 53.3
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 5.6e-14 80.9 58 72.4
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 5.6e-14 80.9 58 72.4
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 5.6e-14 80.9 58 72.4
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 2.2e-10 68.9 49 65.3
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 1.7e-07 59.3 43 72.1


User provided reference genes

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