Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc1937G10 Aethionema arabicum HOM05D000448 ORTHO05D000291 2.6e-46 188.3 93 100.0
Aa31sc2154G10 Aethionema arabicum HOM05D000448 ORTHO05D000291 2.6e-46 188.3 93 100.0
Aa31LG8G10080 Aethionema arabicum HOM05D000448 ORTHO05D000291 2.1e-27 125.6 62 98.4
Aa31LG1G8810 Aethionema arabicum HOM05D000448 ORTHO05D000291 3.4e-14 81.6 94 47.9
Aa31LG2G18310 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.3e-13 79.7 72 52.8
BcaB03g14211 Brassica carinata HOM05D000448 ORTHO05D000291 1.4e-12 76.3 88 52.3
AT3G13950 Arabidopsis thaliana HOM05D000448 ORTHO05D000291 4.2e-12 74.7 76 50.0
AL3G26140 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 9.3e-12 73.6 76 50.0
AL795U10010 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 9.3e-12 73.6 76 50.0
Aa31LG10G13200 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.2e-11 73.2 88 50.0
BcaC06g34956 Brassica carinata HOM05D000448 ORTHO05D000291 1.6e-11 72.8 76 51.3
C05p53780 Brassica napus HOM05D000448 ORTHO05D000291 1.6e-11 72.8 77 48.1
BolC7t42665H Brassica oleracea HOM05D000448 ORTHO05D000291 1.6e-11 72.8 76 51.3
Carub.0003s1352 Capsella rubella HOM05D000448 ORTHO05D000291 2.1e-11 72.4 75 50.7
Aa31LG8G1140 Aethionema arabicum HOM05D000448 ORTHO05D000291 2.7e-11 72.0 74 48.6
BolC5t34046H Brassica oleracea HOM05D000448 ORTHO05D000291 2.7e-11 72.0 77 48.1
BcaB06g25417 Brassica carinata HOM05D000448 ORTHO05D000291 6.0e-11 70.9 76 47.4
A05p35470 Brassica napus HOM05D000448 ORTHO05D000291 6.0e-11 70.9 77 46.8
BraA05t22357Z Brassica rapa HOM05D000448 ORTHO05D000291 6.0e-11 70.9 77 46.8
Sp3g12190 Schrenkiella parvula HOM05D000448 ORTHO05D000291 7.8e-11 70.5 76 44.7
CARHR088760 Cardamine hirsuta HOM05D000448 ORTHO05D000291 1.3e-10 69.7 76 47.4
CARHR256100 Cardamine hirsuta HOM05D000448 ORTHO05D000291 3.0e-10 68.6 74 47.3
Aa31LG7G11610 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.1e-09 66.6 74 50.0
Thhalv10022156m.g Eutrema salsugineum HOM05D000448 ORTHO05D000291 1.5e-09 66.2 71 45.1
BcaC07g39158 Brassica carinata HOM05D000448 ORTHO05D000291 1.9e-09 65.9 74 47.3
C08p21510 Brassica napus HOM05D000448 ORTHO05D000291 1.9e-09 65.9 74 47.3
BolC8t49791H Brassica oleracea HOM05D000448 ORTHO05D000291 1.9e-09 65.9 74 47.3
Cpa.g.sc25.92 Carica papaya HOM05D000448 ORTHO05D000291 3.6e-08 61.6 85 40.0
BolC1t05014H Brassica oleracea HOM05D000448 ORTHO05D000291 4.8e-08 61.2 75 44.0
BcaB03g11909 Brassica carinata HOM05D000448 ORTHO05D000291 8.1e-08 60.5 74 43.2
C01p50650 Brassica napus HOM05D000448 ORTHO05D000291 8.1e-08 60.5 75 44.0
Carub.0007s2994 Capsella rubella HOM05D000448 ORTHO05D000291 8.1e-08 60.5 70 50.0
Aa31LG11G7450 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.8e-07 59.3 74 37.8
AL9U10580 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 2.4e-07 58.9 76 43.4
THA.LOC104810361 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 4.0e-07 58.2 90 42.2
THA.LOC104815630 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 9.9e-06 53.5 85 38.8


User provided reference genes

Program Settings