Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 3.3e-60 235.0 129 100.0
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 3.8e-40 168.3 129 76.0
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 3.8e-40 168.3 129 75.2
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 8.5e-40 167.2 129 71.3
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 2.5e-39 165.6 129 71.3
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 4.2e-39 164.9 129 70.5
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 5.5e-39 164.5 129 70.5
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 2.7e-38 162.2 129 70.5
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 2.7e-38 162.2 129 70.5
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 2.7e-38 162.2 129 70.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 4.7e-38 161.4 129 70.5
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 4.7e-38 161.4 129 70.5
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 1.4e-37 159.8 129 72.1
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 3.0e-37 158.7 129 69.8
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 3.4e-36 155.2 129 69.8
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 9.8e-36 153.7 130 68.5
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.2e-35 152.5 129 68.2
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 8.8e-29 130.6 129 62.8
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 1.5e-28 129.8 132 57.6
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 5.7e-28 127.9 131 58.8
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 3.7e-27 125.2 128 54.7
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 3.7e-27 125.2 128 54.7
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 5.4e-26 121.3 134 55.2
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.6e-25 119.8 132 55.3
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.7e-25 119.0 129 55.8
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 5.9e-25 117.9 124 54.0
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.3e-24 116.7 131 54.2
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.3e-24 116.7 130 57.7
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 1.3e-24 116.7 132 53.0
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 2.9e-24 115.5 129 54.3
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 3.8e-24 115.2 132 53.0
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 6.6e-24 114.4 106 59.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 6.6e-24 114.4 131 55.0
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 6.6e-24 114.4 131 50.4
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.9e-23 112.8 131 51.9
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 4.3e-23 111.7 131 55.0
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 4.3e-23 111.7 131 52.7
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 7.3e-23 110.9 113 57.5
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 7.3e-23 110.9 127 49.6
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 9.5e-23 110.5 131 52.7
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 1.2e-22 110.2 131 48.9
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.1e-22 109.4 128 46.9
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 2.8e-22 109.0 134 49.3
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 3.6e-22 108.6 70 78.6
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 4.7e-22 108.2 131 48.9
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 4.7e-22 108.2 131 48.9
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 4.7e-22 108.2 131 48.9
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 6.1e-22 107.8 129 51.2
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 1.0e-21 107.1 131 50.4
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 1.0e-21 107.1 116 53.4
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 1.0e-21 107.1 129 49.6
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.4e-21 106.7 135 51.1
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.4e-21 106.7 132 50.8
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.4e-21 106.7 134 52.2
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.8e-21 106.3 131 47.3
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.8e-21 106.3 134 52.2
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.3e-21 105.9 157 45.9
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 2.3e-21 105.9 101 57.4
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 3.0e-21 105.5 101 57.4
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 4.0e-21 105.1 107 57.0
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 4.0e-21 105.1 107 55.1
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 5.2e-21 104.8 107 56.1
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 6.8e-21 104.4 130 50.0
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 6.8e-21 104.4 132 47.7
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 8.9e-21 104.0 105 52.4
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 8.9e-21 104.0 131 46.6
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 8.9e-21 104.0 129 53.5
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 1.2e-20 103.6 154 45.5
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 2.0e-20 102.8 110 55.5
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 2.0e-20 102.8 80 61.2
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 3.4e-20 102.1 124 47.6
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 4.4e-20 101.7 129 52.7
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 5.7e-20 101.3 129 47.3
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 7.5e-20 100.9 129 46.5
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 7.5e-20 100.9 132 50.8
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 9.8e-20 100.5 106 53.8
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 9.8e-20 100.5 128 45.3
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 1.3e-19 100.1 129 47.3
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 3.7e-19 98.6 108 51.9
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.4e-19 97.8 132 46.2
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 6.4e-19 97.8 106 51.9
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.1e-18 97.1 132 47.0
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 1.1e-18 97.1 129 45.7
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.8e-18 96.3 129 47.3
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.8e-18 96.3 129 45.7
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 2.4e-18 95.9 129 45.7
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 4.1e-18 95.1 79 62.0
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 4.1e-18 95.1 79 62.0
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 4.1e-18 95.1 129 46.5
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 5.4e-18 94.7 121 43.8
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.2e-17 93.6 79 60.8
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.2e-17 93.6 79 60.8
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 2.0e-17 92.8 138 48.6
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 3.9e-16 88.6 133 45.1
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 6.6e-16 87.8 126 41.3
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 8.6e-16 87.4 126 41.3
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.1e-15 87.0 107 46.7
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 9.5e-15 84.0 87 52.9
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 6.2e-14 81.3 141 42.6
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.4e-13 80.1 78 50.0
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.3e-13 79.3 105 44.8
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 4.0e-13 78.6 134 46.3
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 8.9e-13 77.4 105 43.8
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 5.8e-12 74.7 105 41.9
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 9.8e-12 73.9 110 43.6
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 1.9e-10 69.7 134 41.0
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.3e-08 63.5 106 38.7
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.3e-08 62.8 79 45.6
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 7.3e-07 57.8 142 33.8


User provided reference genes

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