Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 3.9e-38 161.0 83 100.0
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.8e-35 152.1 83 95.2
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.2e-34 149.4 99 82.8
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 3.2e-32 141.4 83 83.1
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 5.5e-32 140.6 83 81.9
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.2e-31 139.4 83 80.7
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.2e-31 139.4 83 80.7
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 2.7e-31 138.3 83 80.7
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 3.6e-31 137.9 83 79.5
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 6.1e-31 137.1 83 80.7
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 6.1e-31 137.1 83 80.7
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 6.1e-31 137.1 83 80.7
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 1.8e-30 135.6 80 81.2
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 2.3e-30 135.2 83 79.5
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 6.7e-30 133.7 83 80.7
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 6.7e-30 133.7 83 80.7
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 2.0e-29 132.1 83 78.3
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.0e-29 132.1 83 78.3
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.0e-29 132.1 83 78.3
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.0e-29 132.1 83 78.3
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 7.4e-29 130.2 80 78.8
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 9.7e-29 129.8 83 77.1
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 1.3e-28 129.4 83 75.9
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.3e-28 129.4 83 74.7
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.3e-28 129.4 83 74.7
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.3e-28 129.4 83 74.7
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.3e-28 129.4 83 74.7
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 1.7e-28 129.0 83 78.3
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 1.7e-28 129.0 83 77.1
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 2.8e-28 128.3 83 74.7
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 3.7e-28 127.9 83 73.5
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 4.8e-28 127.5 83 73.5
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 4.8e-28 127.5 83 77.1
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 4.8e-28 127.5 80 78.8
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.8e-28 127.5 83 73.5
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 6.3e-28 127.1 83 77.1
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.1e-27 126.3 83 74.7
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 1.8e-27 125.6 83 74.7
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 1.8e-27 125.6 83 73.5
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.8e-27 125.6 83 73.5
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 1.8e-27 125.6 83 77.1
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 2.4e-27 125.2 83 74.7
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 75.9
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 73.5
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 77.1
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 75.9
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 73.5
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 72.3
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 3.1e-27 124.8 83 75.9
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 4.1e-27 124.4 83 74.7
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 5.3e-27 124.0 83 74.7
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 9.1e-27 123.2 83 72.3
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.6e-26 121.7 83 73.5
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.5e-26 121.3 83 72.3
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 3.5e-26 121.3 83 71.1
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 3.5e-26 121.3 83 73.5
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 4.5e-26 120.9 83 69.9
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.9e-26 120.6 77 74.0
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 5.9e-26 120.6 83 73.5
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 1.0e-25 119.8 83 68.7
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.0e-25 119.8 74 75.7
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.0e-25 119.8 74 75.7
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.0e-25 119.8 83 69.9
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.7e-25 119.0 83 71.1
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 1.7e-25 119.0 83 71.1
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 2.9e-25 118.2 83 69.9
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 3.8e-25 117.9 83 68.7
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 3.8e-25 117.9 83 72.3
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 8.5e-25 116.7 83 67.5
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 1.1e-24 116.3 83 68.7
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.5e-24 114.0 83 67.5
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.6e-23 112.5 92 64.1
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 4.7e-23 110.9 83 65.1
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.0e-22 109.8 83 65.1
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 2.3e-22 108.6 83 63.9
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 3.0e-22 108.2 76 65.8
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 8.8e-22 106.7 114 53.5
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 1.1e-21 106.3 79 67.1
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.6e-21 105.1 80 62.5
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 5.7e-21 104.0 83 62.7
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.7e-20 102.4 83 60.2
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.5e-18 94.7 62 74.2
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 1.0e-17 93.2 83 55.4
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 1.7e-17 92.4 53 83.0
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 1.7e-17 92.4 57 71.9
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.7e-17 92.4 62 72.6
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 6.5e-17 90.5 57 73.7
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 7.2e-16 87.0 57 71.9
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 6.1e-15 84.0 70 61.4
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 6.8e-14 80.5 52 80.8
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 1.5e-13 79.3 116 40.5
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 4.4e-13 77.8 85 52.9
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.7e-13 77.4 43 86.0
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.5e-13 77.0 80 52.5
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 9.8e-13 76.6 44 86.4
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 3.7e-12 74.7 83 49.4
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 2.4e-11 72.0 85 47.1
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 2.4e-11 72.0 82 50.0
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.0e-10 68.9 87 46.0
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 2.7e-10 68.6 53 66.0
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 1.6e-07 59.3 31 90.3
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.7e-07 57.8 31 87.1
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 2.3e-06 55.5 31 80.6
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 6.8e-06 53.9 77 46.8


User provided reference genes

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