Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.5e-132 474.9 238 100.0
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 2.2e-110 402.5 236 86.9
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.2e-108 396.7 234 84.2
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.0e-107 393.7 237 83.5
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 3.9e-107 391.7 237 82.7
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 7.4e-106 387.5 237 82.3
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 2.0e-95 352.8 240 76.2
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 3.4e-95 352.1 241 73.9
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 4.5e-95 351.7 236 75.4
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 5.9e-95 351.3 237 74.7
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 7.7e-95 350.9 238 75.2
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 7.7e-95 350.9 239 74.9
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 2.9e-94 349.0 236 74.2
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 5.0e-94 348.2 234 75.6
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 6.5e-94 347.8 237 74.7
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 4.2e-93 345.1 235 75.3
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 4.2e-93 345.1 235 75.7
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 7.2e-93 344.4 239 72.8
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 9.4e-93 344.0 236 74.2
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.6e-92 343.2 235 73.6
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.6e-92 343.2 232 75.0
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 2.1e-92 342.8 235 74.0
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.0e-91 340.5 227 76.7
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 2.3e-91 339.3 235 72.8
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 8.8e-91 337.4 231 75.8
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 1.5e-90 336.7 235 73.2
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 2.6e-90 335.9 229 74.7
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 3.3e-90 335.5 235 73.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 3.3e-90 335.5 235 73.2
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 5.7e-90 334.7 225 74.7
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 5.7e-90 334.7 235 72.8
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 7.4e-90 334.3 235 72.8
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 7.4e-90 334.3 238 71.0
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 9.7e-90 334.0 226 74.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 1.3e-89 333.6 235 72.3
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.7e-89 333.2 237 70.9
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.7e-89 333.2 237 70.9
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 2.8e-89 332.4 249 69.1
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 2.8e-89 332.4 249 69.1
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 2.8e-89 332.4 234 71.4
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 3.7e-89 332.0 235 71.5
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 4.8e-89 331.6 240 72.5
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 4.8e-89 331.6 241 72.6
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 6.3e-89 331.3 242 70.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 8.2e-89 330.9 226 75.7
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.8e-88 329.7 246 69.1
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 1.8e-88 329.7 242 70.2
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 2.4e-88 329.3 232 72.4
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 3.1e-88 328.9 231 71.9
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 3.1e-88 328.9 231 71.4
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.1e-88 328.6 237 71.7
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 9.1e-88 327.4 231 72.7
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 9.1e-88 327.4 235 71.5
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.2e-87 327.0 231 73.2
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.6e-87 326.6 242 69.8
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.6e-87 325.9 242 69.4
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 7.7e-87 324.3 227 73.6
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 5.0e-86 321.6 234 71.4
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 8.5e-86 320.9 245 71.4
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 8.5e-86 320.9 230 71.7
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.9e-85 319.7 249 67.9
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.9e-85 319.7 242 68.6
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.2e-85 317.8 228 71.1
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 9.4e-85 317.4 225 71.1
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.2e-84 317.0 243 70.4
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.6e-84 316.6 228 71.1
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 2.7e-84 315.8 232 71.1
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.1e-84 314.7 249 67.1
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 8.0e-84 314.3 243 69.1
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.0e-82 309.7 241 67.6
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.0e-82 309.7 241 67.6
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.1e-80 302.4 235 69.8
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 1.0e-78 297.4 260 62.7
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 8.5e-78 294.3 205 74.1
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.2e-77 292.0 236 63.1
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.2e-76 290.4 243 66.3
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 4.7e-76 288.5 243 65.8
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.8e-75 286.6 227 62.6
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 5.7e-74 281.6 227 64.8
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.3e-73 280.4 228 65.4
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 7.0e-72 274.6 203 70.0
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 6.6e-70 268.1 203 69.0
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 2.1e-68 263.1 174 75.3
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.0e-66 256.5 199 67.3
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.3e-62 243.0 226 59.3
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 6.1e-60 235.0 245 53.5
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 8.9e-59 231.1 226 57.5
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.3e-57 227.3 140 80.0
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.3e-54 216.5 222 52.3
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.4e-48 196.4 223 48.4
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.2e-47 194.1 141 70.9
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 3.5e-47 192.6 244 46.3
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.0e-47 191.8 164 61.6
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 3.3e-45 186.0 154 63.6
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.1e-24 117.9 84 67.9
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.1e-24 117.9 221 33.5
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.8e-11 73.9 123 41.5
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 6.4e-09 65.5 58 58.6


User provided reference genes

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