Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc1921G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.9e-197 691.0 369 100.0
Aa31sc1930G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.9e-197 691.0 369 100.0
Aa31LG7G5280 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.5e-92 344.0 188 99.5
Aa31LG7G5270 Aethionema arabicum HOM05D000031 ORTHO05D000030 5.4e-87 325.5 168 98.8
Aa31LG6G11940 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.0e-67 258.5 167 77.8
Aa31LG6G11930 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.4e-48 195.3 134 73.1
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.8e-43 180.3 167 55.7
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.8e-43 180.3 167 55.7
Aa31LG6G6270 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.8e-42 177.6 163 59.5
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.6e-28 128.6 167 44.3
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.0e-24 118.6 167 42.5
Aa31LG5G5460 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.3e-21 107.5 167 40.7
Aa31LG5G5450 Aethionema arabicum HOM05D008191 ORTHO05D010044 3.7e-19 100.1 169 40.2
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 2.9e-16 90.5 164 30.5
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 1.9e-15 87.8 166 29.5
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 1.6e-14 84.7 166 28.3
Aa31LG5G5530 Aethionema arabicum HOM05D008191 ORTHO05D010044 3.5e-14 83.6 167 30.5
Carub.0004s1276 Capsella rubella HOM05D008191 ORTHO05D010044 6.1e-14 82.8 164 30.5
Aa31LG5G5540 Aethionema arabicum HOM05D008191 ORTHO05D010044 3.9e-13 80.1 181 32.0
CARHR125060 Cardamine hirsuta HOM05D008191 ORTHO05D010044 3.9e-13 80.1 173 30.6
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 8.7e-13 79.0 163 29.4
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 1.9e-12 77.8 164 29.9
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 1.9e-12 77.8 164 29.9
Aa31LG5G5480 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.2e-11 74.3 98 38.8
AL6G44630 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.8e-11 73.9 166 30.7
Carub.0006s2939 Capsella rubella HOM05D008191 ORTHO05D010044 8.2e-11 72.4 163 26.4
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 1.4e-10 71.6 138 31.2
Sp4g10300 Schrenkiella parvula HOM05D008191 ORTHO05D010044 9.0e-10 68.9 169 27.2
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 1.2e-09 68.6 152 26.3
Carub.0005s2245 Capsella rubella HOM05D008191 ORTHO05D010044 4.5e-09 66.6 165 27.9
COL.COLO4_23185 Corchorus olitorius HOM05D008191 ORTHO05D010044 4.5e-09 66.6 152 25.7
Thhalv10017377m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 2.2e-08 64.3 137 29.2
AL6G44660 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 6.5e-08 62.8 154 26.0
AL5G36930 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 1.1e-07 62.0 165 26.7
Thhalv10017285m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 1.2e-06 58.5 165 29.1
QL01p035229 Quercus lobata HOM05D012615 ORTHO05D010044 3.6e-06 57.0 152 27.0


User provided reference genes

Program Settings