Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 7.8e-59 230.3 122 100.0
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 6.4e-45 184.1 123 83.7
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 4.1e-44 181.4 124 82.3
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 4.1e-44 181.4 124 82.3
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 9.2e-44 180.3 124 82.3
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 4.6e-43 177.9 123 78.0
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.0e-42 176.8 123 82.1
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 3.9e-42 174.9 124 79.8
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 4.1e-36 154.8 124 73.4
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.2e-35 153.3 124 70.2
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.0e-34 150.2 124 69.4
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.3e-34 149.8 124 67.7
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.3e-34 149.8 124 68.5
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.5e-33 145.6 122 64.8
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 2.5e-33 145.6 123 66.7
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 3.3e-33 145.2 123 71.5
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 3.3e-33 145.2 123 71.5
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 5.6e-33 144.4 125 68.0
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 4.7e-32 141.4 123 65.0
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 4.7e-32 141.4 123 70.7
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 8.1e-32 140.6 127 66.9
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 1.4e-31 139.8 123 64.2
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.4e-31 139.0 125 64.8
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 6.8e-31 137.5 122 63.1
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.2e-30 136.7 119 67.2
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.2e-30 136.7 119 63.0
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.5e-30 136.3 119 62.2
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.5e-30 136.3 121 62.8
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 2.0e-30 136.0 119 64.7
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 3.4e-30 135.2 122 63.1
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 3.4e-30 135.2 119 63.0
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 3.4e-30 135.2 125 64.0
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 4.4e-30 134.8 125 64.8
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 9.9e-30 133.7 119 61.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.3e-29 133.3 119 62.2
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.2e-29 132.5 121 61.2
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 2.2e-29 132.5 119 62.2
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 4.9e-29 131.3 119 63.0
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 6.4e-29 131.0 123 64.2
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 6.4e-29 131.0 125 59.2
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.1e-28 130.2 121 62.8
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.1e-28 130.2 122 63.9
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.4e-28 129.8 117 61.5
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.4e-28 129.0 121 58.7
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 3.2e-28 128.6 117 59.8
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 4.2e-28 128.3 121 60.3
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 5.4e-28 127.9 122 62.3
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 9.3e-28 127.1 126 61.1
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 9.3e-28 127.1 107 62.6
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 2.7e-27 125.6 122 58.2
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 4.6e-27 124.8 122 60.7
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 7.8e-27 124.0 124 59.7
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.0e-26 123.6 124 60.5
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.3e-26 123.2 124 59.7
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.7e-26 122.9 124 58.9
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.7e-26 122.9 124 58.1
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 2.3e-26 122.5 125 58.4
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 3.0e-26 122.1 123 57.7
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 6.6e-26 120.9 89 68.5
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.1e-25 120.2 123 57.7
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.5e-25 119.8 132 56.1
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 5.6e-25 117.9 112 58.0
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 9.6e-25 117.1 124 58.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 9.6e-25 117.1 118 57.6
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.6e-24 116.3 116 55.2
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.6e-24 116.3 123 55.3
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 2.1e-24 115.9 120 54.2
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 2.1e-24 115.9 120 54.2
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 4.8e-24 114.8 120 55.0
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 6.2e-24 114.4 123 57.7
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 8.1e-24 114.0 118 57.6
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 8.1e-24 114.0 112 57.1
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.4e-23 113.2 66 80.3
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 3.1e-23 112.1 119 52.9
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.0e-23 111.7 116 53.4
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 1.2e-22 110.2 105 61.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.5e-22 109.8 121 53.7
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.3e-21 106.7 119 56.3
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 2.2e-21 105.9 66 74.2
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.9e-21 105.5 122 48.4
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.8e-21 105.1 67 73.1
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 4.9e-21 104.8 98 61.2
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.9e-20 102.8 123 54.5
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.9e-20 102.8 119 51.3
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 2.4e-20 102.4 141 49.6
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 4.2e-20 101.7 121 55.4
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 4.2e-20 101.7 115 52.2
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 4.2e-20 101.7 119 51.3
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 7.1e-20 100.9 118 51.7
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 2.1e-19 99.4 116 51.7
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 4.6e-19 98.2 111 55.0
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 4.6e-19 98.2 100 55.0
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.3e-18 96.7 124 54.8
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.7e-18 96.3 73 64.4
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.3e-18 95.9 61 72.1
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 3.0e-18 95.5 112 58.0
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 5.1e-18 94.7 107 53.3
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.6e-18 94.4 67 68.7
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.6e-18 94.4 67 68.7
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.1e-17 93.6 66 68.2
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.5e-17 93.2 113 56.6
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.5e-17 93.2 74 59.5
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 3.3e-17 92.0 105 51.4
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.6e-16 89.7 108 48.1
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 2.8e-16 89.0 104 54.8
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 6.2e-16 87.8 108 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.1e-12 77.0 124 41.1
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-12 76.6 86 45.3
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 7.1e-12 74.3 123 46.3
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.5e-11 72.0 86 44.2
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 1.3e-10 70.1 117 47.0
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 6.7e-10 67.8 86 46.5
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 8.7e-10 67.4 110 42.7
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 5.8e-06 54.7 108 36.1


User provided reference genes

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