Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc158G40 Aethionema arabicum HOM05D005904 ORTHO05D007074 1.4e-29 132.1 61 100.0
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 1.3e-06 55.8 42 64.3
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 1.3e-06 55.8 42 64.3
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 2.2e-06 55.1 38 65.8
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 2.2e-06 55.1 35 71.4
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 2.9e-06 54.7 33 75.8
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 2.9e-06 54.7 42 64.3
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 2.9e-06 54.7 33 75.8
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 3.8e-06 54.3 42 64.3
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 3.8e-06 54.3 33 75.8
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 5.0e-06 53.9 33 72.7
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 6.5e-06 53.5 34 73.5
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 6.5e-06 53.5 33 72.7
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 8.5e-06 53.1 30 80.0
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 8.5e-06 53.1 30 80.0
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 8.5e-06 53.1 36 66.7
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 8.5e-06 53.1 38 63.2
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 8.5e-06 53.1 38 63.2
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 8.5e-06 53.1 42 59.5


User provided reference genes

Program Settings