Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 6.6e-94 347.4 185 100.0
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 3.2e-72 275.4 187 78.6
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 9.3e-72 273.9 187 79.7
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 3.5e-71 271.9 188 79.3
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 2.3e-70 269.2 188 78.2
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 2.3e-70 269.2 187 78.1
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.1e-67 260.4 187 77.0
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.3e-62 243.4 187 71.1
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.3e-62 243.4 187 71.1
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 2.3e-62 242.7 187 71.1
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 5.1e-62 241.5 189 71.4
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.5e-61 240.0 195 69.2
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.5e-61 240.0 195 69.2
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.6e-60 236.5 192 72.4
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 3.7e-60 235.3 187 70.1
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.0e-57 227.3 185 67.6
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 6.5e-57 224.6 189 65.6
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 5.0e-49 198.4 185 61.6
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 4.2e-48 195.3 178 60.7
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 4.6e-47 191.8 183 61.7
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 7.9e-47 191.0 184 62.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.3e-46 190.3 178 60.1
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 2.3e-46 189.5 196 60.2
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 3.9e-46 188.7 180 58.3
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 5.1e-46 188.3 178 59.0
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 1.9e-45 186.4 162 59.9
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 3.3e-45 185.7 184 59.8
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 7.4e-45 184.5 186 61.8
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 3.7e-44 182.2 157 65.6
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 4.8e-44 181.8 183 59.6
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 8.2e-44 181.0 183 57.4
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 1.8e-43 179.9 181 60.2
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 4.1e-43 178.7 186 58.6
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 4.1e-43 178.7 188 54.3
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.9e-43 177.9 147 66.7
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 6.9e-43 177.9 173 59.0
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.2e-42 177.2 157 65.0
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 1.5e-42 176.8 179 60.3
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.5e-42 176.8 179 61.5
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.0e-42 176.4 148 64.9
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 2.6e-42 176.0 171 59.1
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 2.6e-42 176.0 181 55.2
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 2.6e-42 176.0 171 56.7
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 4.5e-42 175.3 156 65.4
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.0e-41 174.1 181 57.5
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 1.0e-41 174.1 179 55.9
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.0e-41 174.1 184 55.4
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 2.2e-41 172.9 184 57.6
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 3.8e-41 172.2 184 59.2
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 6.5e-41 171.4 157 61.8
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 6.5e-41 171.4 128 70.3
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 6.5e-41 171.4 186 57.5
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 8.5e-41 171.0 140 64.3
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 1.1e-40 170.6 185 56.8
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.4e-40 170.2 192 56.2
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.4e-40 170.2 192 56.2
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 3.2e-40 169.1 172 58.7
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.5e-40 168.3 179 59.8
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.5e-40 168.3 179 59.8
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 7.2e-40 167.9 189 57.1
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.6e-39 166.8 123 69.1
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.6e-39 166.8 159 59.1
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 2.1e-39 166.4 185 54.6
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 2.7e-39 166.0 116 74.1
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 4.6e-39 165.2 125 67.2
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 4.6e-39 165.2 178 56.2
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.0e-38 164.1 185 52.4
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 1.0e-38 164.1 130 67.7
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.0e-38 164.1 184 53.3
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.4e-38 163.7 167 55.1
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.8e-38 163.3 176 51.7
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 1.8e-38 163.3 128 68.0
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 1.8e-38 163.3 183 53.0
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 2.3e-38 162.9 185 56.8
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 3.0e-38 162.5 188 52.7
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 3.0e-38 162.5 190 52.6
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 6.7e-38 161.4 129 63.6
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 2.0e-37 159.8 173 55.5
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 4.4e-37 158.7 189 53.4
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 1.7e-36 156.8 161 59.6
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 3.7e-36 155.6 161 59.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.1e-35 154.1 128 66.4
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.1e-35 154.1 174 54.6
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.4e-35 152.9 147 59.9
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 4.1e-35 152.1 89 82.0
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 5.3e-35 151.8 157 54.8
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 2.6e-34 149.4 138 62.3
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 3.8e-33 145.6 153 50.3
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.1e-32 144.1 88 77.3
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.9e-32 143.3 189 49.7
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 9.4e-32 141.0 109 67.0
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 1.2e-31 140.6 163 49.1
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.1e-31 139.8 174 54.6
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 3.6e-31 139.0 130 57.7
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 6.1e-31 138.3 126 61.1
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 7.9e-31 137.9 90 74.4
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 2.8e-28 129.4 137 49.6
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 7.0e-27 124.8 131 51.1
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.0e-25 120.9 145 55.9
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.2e-23 114.0 165 42.4
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.8e-22 110.2 180 41.1
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.3e-22 109.8 154 53.2
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.7e-18 94.7 128 52.3
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.5e-16 90.5 114 49.1
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 3.2e-16 89.4 120 43.3
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 2.1e-15 86.7 107 55.1
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.0e-14 84.3 180 37.8


User provided reference genes

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