Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 2.3e-137 492.3 258 100.0
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.1e-97 360.5 249 80.7
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.8e-97 359.8 259 77.6
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 4.1e-94 348.6 253 78.3
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 2.3e-92 342.8 252 76.6
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 8.1e-90 334.3 250 75.6
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 3.7e-87 325.5 238 76.5
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 4.9e-87 325.1 238 76.5
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 9.2e-86 320.9 249 73.9
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 2.1e-82 309.7 248 73.4
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 9.0e-73 277.7 199 77.9
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 3.0e-68 262.7 258 60.5
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 4.5e-64 248.8 185 74.1
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 1.1e-59 234.2 244 57.0
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 1.5e-59 233.8 245 56.7
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.1e-57 227.6 150 71.3
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.8e-57 226.9 253 55.3
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.4e-57 226.5 150 71.3
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 4.0e-57 225.7 214 59.3
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 9.0e-57 224.6 160 71.9
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 1.7e-55 220.3 241 54.8
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 4.9e-55 218.8 258 50.4
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 8.4e-55 218.0 145 75.2
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 1.1e-54 217.6 253 55.3
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.1e-54 217.6 234 56.0
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 1.1e-54 217.6 234 56.0
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 1.4e-54 217.2 252 52.8
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 1.9e-54 216.9 176 63.1
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.9e-54 216.9 240 52.1
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 2.5e-54 216.5 228 55.3
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 3.2e-54 216.1 194 59.3
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.2e-54 215.7 124 80.6
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 5.5e-54 215.3 168 67.9
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 7.1e-54 214.9 234 55.6
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 1.2e-53 214.2 253 53.0
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 1.6e-53 213.8 242 54.1
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 2.7e-53 213.0 210 61.0
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 3.5e-53 212.6 248 53.6
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 4.6e-53 212.2 246 54.9
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 4.6e-53 212.2 259 51.4
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 1.3e-52 210.7 242 50.8
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 1.3e-52 210.7 122 84.4
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 2.3e-52 209.9 255 49.8
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 2.3e-52 209.9 256 49.2
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 3.0e-52 209.5 245 52.7
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 3.0e-52 209.5 257 49.4
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 3.0e-52 209.5 130 77.7
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 5.1e-52 208.8 141 72.3
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 6.7e-52 208.4 159 67.9
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 6.7e-52 208.4 149 67.1
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 8.7e-52 208.0 135 71.1
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 1.9e-51 206.8 133 73.7
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 1.9e-51 206.8 131 74.8
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 1.9e-51 206.8 164 67.1
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 3.3e-51 206.1 149 65.8
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 4.3e-51 205.7 246 52.8
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 4.3e-51 205.7 240 53.3
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 1.3e-50 204.1 143 66.4
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 1.6e-50 203.8 155 67.7
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 1.6e-50 203.8 235 52.8
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 6.3e-50 201.8 126 79.4
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 8.2e-50 201.4 229 50.7
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.1e-49 201.1 145 65.5
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.4e-49 199.9 243 49.8
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 3.1e-49 199.5 174 57.5
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 2.6e-48 196.4 191 55.0
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 4.5e-48 195.7 164 59.1
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 1.3e-47 194.1 124 72.6
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 1.7e-47 193.7 124 73.4
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 2.9e-47 193.0 109 83.5
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 5.0e-47 192.2 130 69.2
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 6.5e-47 191.8 221 52.5
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 3.2e-46 189.5 143 61.5
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 4.2e-46 189.1 172 54.7
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 9.3e-46 188.0 232 46.1
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 3.5e-45 186.0 231 45.5
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 3.5e-45 186.0 135 65.2
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 3.5e-45 186.0 115 77.4
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 6.1e-45 185.3 224 50.9
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.9e-44 182.6 244 45.5
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 5.1e-44 182.2 225 51.6
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 1.5e-43 180.6 133 64.7
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.3e-42 177.6 146 57.5
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 2.8e-42 176.4 121 69.4
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 4.8e-42 175.6 131 62.6
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 6.3e-42 175.3 132 67.4
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 8.2e-42 174.9 228 46.1
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.1e-41 174.5 128 64.1
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 1.1e-41 174.5 124 65.3
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 1.4e-41 174.1 122 64.8
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.4e-41 173.3 124 65.3
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 3.1e-41 172.9 131 61.8
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 3.1e-41 172.9 128 66.4
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 3.1e-41 172.9 109 76.1
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 3.4e-40 169.5 109 75.2
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 4.5e-40 169.1 127 62.2
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.2e-39 166.8 232 46.1
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 1.1e-38 164.5 128 62.5
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 1.4e-38 164.1 144 54.2
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 1.6e-37 160.6 219 45.2
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 4.6e-37 159.1 136 56.6
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.4e-36 157.5 97 73.2
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.6e-32 143.3 123 58.5
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.6e-32 143.3 123 58.5
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 1.7e-31 140.6 89 73.0
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 5.1e-28 129.0 220 38.2
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 7.4e-27 125.2 154 42.9
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 2.2e-26 123.6 92 64.1
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 4.8e-26 122.5 133 47.4
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.5e-22 110.9 244 38.1
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 3.8e-15 86.3 203 36.9
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 1.2e-13 81.3 177 37.3
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 6.1e-13 79.0 48 70.8
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 1.4e-12 77.8 154 33.8
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 4.5e-08 62.8 105 33.3
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 5.5e-06 55.8 98 27.6


User provided reference genes

Program Settings