Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc1323G20 Aethionema arabicum HOM05D002011 ORTHO05D001948 5.1e-73 277.7 146 100.0
Thhalv10000364m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 5.0e-20 101.7 144 48.6
Sp4g04360 Schrenkiella parvula HOM05D002011 ORTHO05D001948 5.5e-19 98.2 141 49.6
A04p19630 Brassica napus HOM05D002011 ORTHO05D001948 3.6e-18 95.5 139 50.4
BcaC02g08361 Brassica carinata HOM05D002011 ORTHO05D001948 6.1e-18 94.7 144 47.9
C04p55210 Brassica napus HOM05D002011 ORTHO05D001948 6.1e-18 94.7 144 47.9
BolC4t27060H Brassica oleracea HOM05D002011 ORTHO05D001948 6.1e-18 94.7 144 47.9
BraA04t17554Z Brassica rapa HOM05D002011 ORTHO05D001948 6.1e-18 94.7 139 49.6
CARHR116290 Cardamine hirsuta HOM05D002011 ORTHO05D001948 8.0e-18 94.4 130 47.7
BcaB06g28049 Brassica carinata HOM05D002011 ORTHO05D001948 1.3e-15 87.0 135 48.1
Thhalv10025671m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 4.8e-15 85.1 132 40.2
THA.LOC104803640 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 2.6e-13 79.3 137 43.8
THA.LOC104803849 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 3.5e-13 79.0 138 42.8
AT4G32030 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 7.7e-13 77.8 134 38.1
Cpa.g.sc127.1 Carica papaya HOM05D002011 ORTHO05D001948 7.7e-13 77.8 147 37.4
BolC7t46354H Brassica oleracea HOM05D002011 ORTHO05D001948 1.0e-12 77.4 136 38.2
C07p59060 Brassica napus HOM05D002011 ORTHO05D001948 3.8e-12 75.5 136 37.5
BraA03t15165Z Brassica rapa HOM05D002011 ORTHO05D001948 6.5e-12 74.7 136 37.5
Carub.0007s0852 Capsella rubella HOM05D002011 ORTHO05D001948 6.5e-12 74.7 135 37.0
AL7G19860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 1.1e-11 73.9 131 38.2
Sp7g29830 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.1e-11 73.9 141 38.3
BraA01t00593Z Brassica rapa HOM05D002011 ORTHO05D001948 1.9e-11 73.2 139 39.6
Ciclev10009242m.g Citrus clementina HOM05D002011 ORTHO05D001948 1.9e-11 73.2 140 37.9
Manes.16G126300 Manihot esculenta HOM05D002011 ORTHO05D001948 2.5e-11 72.8 147 34.0
A01p06260 Brassica napus HOM05D002011 ORTHO05D001948 3.2e-11 72.4 139 39.6
A03p61210 Brassica napus HOM05D002011 ORTHO05D001948 3.2e-11 72.4 136 36.8
C01p06900 Brassica napus HOM05D002011 ORTHO05D001948 2.1e-10 69.7 139 39.6
CARHR239930 Cardamine hirsuta HOM05D002011 ORTHO05D001948 2.7e-10 69.3 132 38.6
BcaB03g12730 Brassica carinata HOM05D002011 ORTHO05D001948 6.1e-10 68.2 143 35.0
BcaC09g51992 Brassica carinata HOM05D002011 ORTHO05D001948 6.1e-10 68.2 139 38.8
BolC1t00687H Brassica oleracea HOM05D002011 ORTHO05D001948 6.1e-10 68.2 139 38.8
BcaNung03130 Brassica carinata HOM05D002011 ORTHO05D001948 8.0e-10 67.8 132 36.4
VMungo1309G3164 Vigna mungo HOM05D002011 ORTHO05D001948 1.0e-09 67.4 141 33.3
Hma1.2p1_0228F.1_g096600 Hydrangea macrophylla HOM05D002011 ORTHO05D001948 1.4e-09 67.0 143 34.3
MD15G1131300 Malus domestica HOM05D002011 ORTHO05D001948 2.3e-09 66.2 139 36.0
BraA08t33793Z Brassica rapa HOM05D002011 ORTHO05D001948 3.0e-09 65.9 138 39.9
COL.COLO4_18921 Corchorus olitorius HOM05D002011 ORTHO05D001948 3.0e-09 65.9 131 36.6
A08p18360 Brassica napus HOM05D002011 ORTHO05D001948 6.7e-09 64.7 138 39.1
Prupe.1G486600 Prunus persica HOM05D002011 ORTHO05D001948 6.7e-09 64.7 149 35.6
Actinidia23086 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.2e-08 63.9 130 33.1
CSS0035080 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 1.5e-08 63.5 144 34.0
Phvul.009G090200 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 1.5e-08 63.5 141 31.9
Glyma.06G065100 Glycine max HOM05D002011 ORTHO05D001948 2.0e-08 63.2 139 32.4
Sed0005888 Sechium edule HOM05D002011 ORTHO05D001948 2.0e-08 63.2 134 34.3
Duzib187G1916 Durio zibethinus HOM05D002011 ORTHO05D001948 2.6e-08 62.8 147 32.7
Actinidia14104 Actinidia chinensis HOM05D002011 ORTHO05D001948 4.4e-08 62.0 144 34.0
Gorai.001G036200 Gossypium raimondii HOM05D002011 ORTHO05D001948 4.4e-08 62.0 124 38.7
MD08G1154000 Malus domestica HOM05D002011 ORTHO05D001948 4.4e-08 62.0 136 33.1
THA.LOC104799044 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 5.7e-08 61.6 139 34.5
TPR.G3107 Trifolium pratense HOM05D002011 ORTHO05D001948 1.3e-07 60.5 140 31.4
Glyma.04G063900 Glycine max HOM05D002011 ORTHO05D001948 1.7e-07 60.1 141 31.9
Gohir.D07G034500 Gossypium hirsutum HOM05D002011 ORTHO05D001948 2.2e-07 59.7 122 38.5
BcaC01g01041 Brassica carinata HOM05D002011 ORTHO05D001948 2.8e-07 59.3 138 34.8
BolC3t21060H Brassica oleracea HOM05D002011 ORTHO05D001948 2.8e-07 59.3 138 34.8
CSS0040463 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 3.7e-07 58.9 134 29.9
Manes.03G011400 Manihot esculenta HOM05D002011 ORTHO05D001948 3.7e-07 58.9 150 32.0
vmacro11223 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 3.7e-07 58.9 132 31.8
QL02p020109 Quercus lobata HOM05D002011 ORTHO05D001948 4.8e-07 58.5 134 33.6
CiPaw.07G227200 Carya illinoinensis HOM05D002011 ORTHO05D001948 6.3e-07 58.2 147 31.3
THA.LOC104818603 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 6.3e-07 58.2 139 33.8
Medtr3g106340 Medicago truncatula HOM05D002011 ORTHO05D001948 8.2e-07 57.8 143 31.5
Lalb_Chr23g0268371 Lupinus albus HOM05D002011 ORTHO05D001948 1.1e-06 57.4 144 34.0
Rhsim02G0206600 Rhododendron simsii HOM05D002011 ORTHO05D001948 1.4e-06 57.0 127 29.1
PGR044G0932 Punica granatum HOM05D002011 ORTHO05D001948 2.4e-06 56.2 71 40.8
TWI34G1253 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 2.4e-06 56.2 134 32.8
Atru.chr7.2505 Acer truncatum HOM05D002011 ORTHO05D001948 3.1e-06 55.8 140 33.6
TWI63G1833 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 3.1e-06 55.8 129 33.3
CiPaw.08G008100 Carya illinoinensis HOM05D002011 ORTHO05D001948 4.1e-06 55.5 148 29.7
DCAR_003008 Daucus carota HOM05D002011 ORTHO05D001948 5.3e-06 55.1 150 30.7
Dinv03417 Davidia involucrata HOM05D002011 ORTHO05D001948 5.3e-06 55.1 122 34.4
Gohir.A07G030600 Gossypium hirsutum HOM05D002011 ORTHO05D001948 5.3e-06 55.1 118 38.1
PSO017G2943 Papaver somniferum HOM05D002011 ORTHO05D001948 5.3e-06 55.1 60 43.3
PSO170G6599 Papaver somniferum HOM05D002011 ORTHO05D001948 5.3e-06 55.1 60 43.3
Potri.006G259700 Populus trichocarpa HOM05D002011 ORTHO05D001948 5.3e-06 55.1 133 32.3
Sed0021865 Sechium edule HOM05D002011 ORTHO05D001948 5.3e-06 55.1 140 27.1
Hund19962 Selenicereus undatus HOM05D002011 ORTHO05D001948 5.3e-06 55.1 140 30.7
Actinidia22311 Actinidia chinensis HOM05D002011 ORTHO05D001948 7.0e-06 54.7 127 29.1
CSS0039956 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 9.1e-06 54.3 157 31.8
Lj1g0007627 Lotus japonicus HOM05D002011 ORTHO05D001948 9.1e-06 54.3 142 32.4
Psat5g036760 Pisum sativum HOM05D002011 ORTHO05D001948 9.1e-06 54.3 141 31.2


User provided reference genes

Program Settings