Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc1323G10 Aethionema arabicum HOM05D002011 ORTHO05D001948 9.0e-63 243.8 162 100.0
Sp4g04360 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.6e-22 110.2 106 58.5
CARHR116290 Cardamine hirsuta HOM05D002011 ORTHO05D001948 1.7e-21 106.7 109 56.0
Thhalv10000568m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 9.4e-20 100.9 91 59.3
BcaC02g08361 Brassica carinata HOM05D002011 ORTHO05D001948 3.0e-18 95.9 104 53.8
BcaNung06960 Brassica carinata HOM05D002011 ORTHO05D001948 3.0e-18 95.9 104 53.8
C04p55210 Brassica napus HOM05D002011 ORTHO05D001948 3.0e-18 95.9 104 53.8
Sp7g29830 Schrenkiella parvula HOM05D002011 ORTHO05D001948 3.0e-18 95.9 110 55.5
BolC4t27060H Brassica oleracea HOM05D002011 ORTHO05D001948 4.0e-18 95.5 104 53.8
BraA04t17554Z Brassica rapa HOM05D002011 ORTHO05D001948 1.5e-17 93.6 104 52.9
A04p19630 Brassica napus HOM05D002011 ORTHO05D001948 3.4e-17 92.4 104 51.9
Thhalv10025671m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 9.8e-17 90.9 110 53.6
Carub.0007s0852 Capsella rubella HOM05D002011 ORTHO05D001948 1.3e-16 90.5 101 54.5
BcaB06g28049 Brassica carinata HOM05D002011 ORTHO05D001948 2.8e-16 89.4 104 52.9
AL7G19860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 3.7e-16 89.0 108 53.7
CARHR239930 Cardamine hirsuta HOM05D002011 ORTHO05D001948 6.3e-16 88.2 90 60.0
BcaC09g51992 Brassica carinata HOM05D002011 ORTHO05D001948 1.4e-15 87.0 104 49.0
C01p06900 Brassica napus HOM05D002011 ORTHO05D001948 1.4e-15 87.0 104 49.0
BolC1t00687H Brassica oleracea HOM05D002011 ORTHO05D001948 1.4e-15 87.0 104 49.0
A03p61210 Brassica napus HOM05D002011 ORTHO05D001948 2.4e-15 86.3 96 56.2
THA.LOC104818603 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 3.1e-15 85.9 91 56.0
A01p06260 Brassica napus HOM05D002011 ORTHO05D001948 4.1e-15 85.5 106 49.1
BraA01t00593Z Brassica rapa HOM05D002011 ORTHO05D001948 7.0e-15 84.7 104 48.1
AT4G32030 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 1.2e-14 84.0 102 52.9
BraA03t15165Z Brassica rapa HOM05D002011 ORTHO05D001948 2.0e-14 83.2 97 52.6
BcaC01g01041 Brassica carinata HOM05D002011 ORTHO05D001948 2.7e-14 82.8 103 50.5
BolC3t21060H Brassica oleracea HOM05D002011 ORTHO05D001948 2.7e-14 82.8 103 50.5
BolC7t46354H Brassica oleracea HOM05D002011 ORTHO05D001948 2.7e-14 82.8 98 54.1
BraA08t33793Z Brassica rapa HOM05D002011 ORTHO05D001948 2.7e-14 82.8 93 53.8
BcaNung03130 Brassica carinata HOM05D002011 ORTHO05D001948 4.5e-14 82.0 91 52.7
C07p59060 Brassica napus HOM05D002011 ORTHO05D001948 4.5e-14 82.0 98 54.1
THA.LOC104803640 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 7.7e-14 81.3 96 52.1
A08p18360 Brassica napus HOM05D002011 ORTHO05D001948 1.0e-13 80.9 103 49.5
THA.LOC104803849 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 1.1e-12 77.4 107 47.7
BcaB03g12730 Brassica carinata HOM05D002011 ORTHO05D001948 2.1e-11 73.2 107 46.7
Gohir.A07G030600 Gossypium hirsutum HOM05D002011 ORTHO05D001948 1.8e-10 70.1 94 47.9
CiPaw.08G008100 Carya illinoinensis HOM05D002011 ORTHO05D001948 1.2e-09 67.4 93 47.3
Cfa013098 Carpinus fangiana HOM05D002011 ORTHO05D001948 2.6e-09 66.2 92 47.8
Gohir.D07G034500 Gossypium hirsutum HOM05D002011 ORTHO05D001948 2.6e-09 66.2 94 45.7
Gorai.001G036200 Gossypium raimondii HOM05D002011 ORTHO05D001948 4.4e-09 65.5 94 45.7
Atru.chr7.2505 Acer truncatum HOM05D002011 ORTHO05D001948 7.5e-09 64.7 98 43.9
TWI32G0803 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 7.5e-09 64.7 93 48.4
CiPaw.07G227200 Carya illinoinensis HOM05D002011 ORTHO05D001948 1.3e-08 63.9 90 47.8
TWI34G1253 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 1.3e-08 63.9 93 49.5
Cpa.g.sc127.2 Carica papaya HOM05D002011 ORTHO05D001948 3.7e-08 62.4 97 44.3
Ciclev10009242m.g Citrus clementina HOM05D002011 ORTHO05D001948 4.9e-08 62.0 95 43.2
CSS0040463 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 1.4e-07 60.5 91 39.6
Duzib168G0584 Durio zibethinus HOM05D002011 ORTHO05D001948 2.4e-07 59.7 93 45.2
Duzib187G1916 Durio zibethinus HOM05D002011 ORTHO05D001948 2.4e-07 59.7 95 46.3
Manes.03G011400 Manihot esculenta HOM05D002011 ORTHO05D001948 2.4e-07 59.7 90 45.6
QL02p020109 Quercus lobata HOM05D002011 ORTHO05D001948 2.4e-07 59.7 97 41.2
Ciclev10026302m.g Citrus clementina HOM05D002011 ORTHO05D001948 3.1e-07 59.3 97 39.2
CARHR016310 Cardamine hirsuta HOM05D002011 ORTHO05D001948 4.1e-07 58.9 89 38.2
Cpa.g.sc10.124 Carica papaya HOM05D002011 ORTHO05D001948 4.1e-07 58.9 91 36.3
Lsat_1_v5_gn_6_115360 Lactuca sativa HOM05D002011 ORTHO05D001948 5.4e-07 58.5 91 41.8
Hma1.2p1_0228F.1_g096600 Hydrangea macrophylla HOM05D002011 ORTHO05D001948 9.2e-07 57.8 97 41.2
TAR636G1642 Trochodendron aralioides HOM05D002011 ORTHO05D001948 9.2e-07 57.8 91 47.3
Nn2g12257 Nelumbo nucifera HOM05D002011 ORTHO05D001948 1.2e-06 57.4 92 41.3
Sc23g0006520 Simmondsia chinensis HOM05D002011 ORTHO05D001948 1.2e-06 57.4 90 40.0
SGA_v2.0_scaffold37G14736 Striga asiatica HOM05D002011 ORTHO05D001948 1.2e-06 57.4 93 40.9
CANSAT56G3958 Cannabis sativa HOM05D002011 ORTHO05D001948 2.0e-06 56.6 92 38.0
Dinv18151 Davidia involucrata HOM05D002011 ORTHO05D001948 2.0e-06 56.6 91 39.6
FAN15G2620 Fragaria x ananassa HOM05D002011 ORTHO05D001948 2.0e-06 56.6 98 39.8
HanXRQChr01g0030661 Helianthus annuus HOM05D036997 ORTHO05D035153 2.0e-06 56.6 90 40.0
Cfa001910 Carpinus fangiana HOM05D002011 ORTHO05D001948 2.7e-06 56.2 91 40.7
Thhalv10019140m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 3.5e-06 55.8 89 37.1
Actinidia08950 Actinidia chinensis HOM05D002011 ORTHO05D001948 4.5e-06 55.5 91 37.4
Haze_16633 Corylus avellana HOM05D002011 ORTHO05D001948 4.5e-06 55.5 91 39.6
Haze_16635 Corylus avellana HOM05D002011 ORTHO05D001948 4.5e-06 55.5 91 39.6
Sed0005888 Sechium edule HOM05D002011 ORTHO05D001948 4.5e-06 55.5 94 36.2
TAR383G0822 Trochodendron aralioides HOM05D002011 ORTHO05D001948 4.5e-06 55.5 92 41.3
vmacro11223 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 4.5e-06 55.5 94 35.1
C03p21780 Brassica napus HOM05D006735 ORTHO05D009558 5.9e-06 55.1 53 54.7
COL.COLO4_18921 Corchorus olitorius HOM05D002011 ORTHO05D001948 5.9e-06 55.1 86 47.7
Gohir.A05G057100 Gossypium hirsutum HOM05D002011 ORTHO05D001948 5.9e-06 55.1 97 42.3
MD08G1154000 Malus domestica HOM05D002011 ORTHO05D001948 5.9e-06 55.1 95 44.2
MD09G1223300 Malus domestica HOM05D002011 ORTHO05D001948 5.9e-06 55.1 94 38.3
Manes.16G126300 Manihot esculenta HOM05D002011 ORTHO05D001948 5.9e-06 55.1 94 41.5
RcHm_v2.0_Chr6g0297181 Rosa chinensis HOM05D002011 ORTHO05D001948 5.9e-06 55.1 106 40.6
THA.LOC104799044 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 5.9e-06 55.1 100 41.0
THA.LOC104813579 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 5.9e-06 55.1 86 36.0
MSTRG.11167 Avicennia marina HOM05D002011 ORTHO05D001948 7.7e-06 54.7 98 41.8


User provided reference genes

Program Settings