Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc1307G10 Aethionema arabicum HOM05D009674 ORTHO05D000016 3.6e-91 338.2 165 100.0
Aa31sc566G10 Aethionema arabicum HOM05D011547 ORTHO05D000016 5.6e-68 261.2 139 91.4
Aa31sc899G10 Aethionema arabicum HOM05D011547 ORTHO05D000016 2.9e-40 169.1 118 68.6
Aa31sc155G20 Aethionema arabicum HOM05D000014 ORTHO05D000016 1.3e-24 117.1 71 76.1
Aa31sc1407G10 Aethionema arabicum HOM05D000014 ORTHO05D000093 3.5e-22 109.0 79 70.9
Aa31sc1048G10 Aethionema arabicum HOM05D011547 ORTHO05D000016 6.0e-22 108.2 71 70.4
Aa31sc165G40 Aethionema arabicum HOM05D008567 ORTHO05D000016 6.7e-21 104.8 117 43.6
Aa31sc75G30 Aethionema arabicum HOM05D008567 ORTHO05D000016 5.6e-20 101.7 112 45.5
Aa31LG2G17350 Aethionema arabicum HOM05D011547 ORTHO05D000016 7.4e-20 101.3 61 72.1
Aa31sc12G50 Aethionema arabicum HOM05D000014 ORTHO05D000016 3.6e-19 99.0 79 59.5
Aa31sc1155G10 Aethionema arabicum HOM05D000014 ORTHO05D000016 4.5e-17 92.0 114 43.0
Aa31sc1126G10 Aethionema arabicum HOM05D000014 ORTHO05D000016 1.3e-16 90.5 114 43.0
Aa31sc433G10 Aethionema arabicum HOM05D011564 ORTHO05D000016 3.8e-16 89.0 78 53.8
Aa31sc1414G10 Aethionema arabicum HOM05D000014 ORTHO05D000016 4.9e-16 88.6 78 53.8
Aa31sc28G30 Aethionema arabicum HOM05D009674 ORTHO05D000016 1.4e-15 87.0 72 59.7
Aa31sc657G40 Aethionema arabicum HOM05D000014 ORTHO05D000016 1.4e-15 87.0 79 50.6
BcaC05g28050 Brassica carinata HOM05D000014 ORTHO05D000016 1.6e-14 83.6 112 38.4
BcaC06g35965 Brassica carinata HOM05D000014 ORTHO05D000016 2.3e-13 79.7 88 44.3
Aa31sc864G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 3.0e-13 79.3 65 52.3
BcaC07g37390 Brassica carinata HOM05D000014 ORTHO05D000016 3.9e-13 79.0 74 47.3
BcaB07g33244 Brassica carinata HOM05D000014 ORTHO05D000016 1.1e-12 77.4 88 40.9
BcaC01g01904 Brassica carinata HOM05D000014 ORTHO05D000016 1.1e-12 77.4 122 35.2
Aa31sc12G60 Aethionema arabicum HOM05D009674 ORTHO05D000016 1.6e-11 73.6 70 57.1
Aa31sc349G10 Aethionema arabicum HOM05D009674 ORTHO05D000016 2.8e-11 72.8 53 67.9
AUR62015090 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.8e-11 72.0 78 37.2
BcaC06g34923 Brassica carinata HOM05D000014 ORTHO05D000016 6.2e-11 71.6 78 44.9
Aa31sc15G20 Aethionema arabicum HOM05D009674 ORTHO05D011246 8.1e-11 71.2 53 66.0
Aa31sc374G30 Aethionema arabicum HOM05D009674 ORTHO05D000016 2.4e-10 69.7 53 67.9
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 2.4e-10 69.7 77 36.4
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 2.4e-10 69.7 77 36.4
AUR62041173 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.0e-10 68.9 75 37.3
Ah.13g070800 Amaranthus hybridus HOM05D000014 ORTHO05D000016 5.3e-10 68.6 63 42.9
TWI23G1083 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.0e-09 66.6 82 39.0
BcaB07g33921 Brassica carinata HOM05D000014 ORTHO05D000016 2.6e-09 66.2 78 39.7
TWI56G1009 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 2.6e-09 66.2 82 39.0
TWI74G0887 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.6e-09 66.2 82 39.0
Ah.01g010830 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.4e-09 65.9 76 35.5
Ah.01g018090 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.4e-09 65.9 76 35.5
Ah.12g065520 Amaranthus hybridus HOM05D000014 ORTHO05D000093 3.4e-09 65.9 76 35.5
FvH4_4g02101 Fragaria vesca HOM05D000014 ORTHO05D000016 5.8e-09 65.1 94 35.1
Aa31sc75G40 Aethionema arabicum HOM05D000014 ORTHO05D000016 7.6e-09 64.7 42 76.2
Oeu017629.1 Olea europaea HOM05D000014 ORTHO05D000016 7.6e-09 64.7 81 39.5
Oeu026335.1 Olea europaea HOM05D000014 ORTHO05D000016 1.0e-08 64.3 73 41.1
Ah.02g117660 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.7e-08 63.5 76 35.5
AUR62030749 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.2e-08 63.2 69 39.1
FvH4_1g29771 Fragaria vesca HOM05D000014 ORTHO05D000016 2.9e-08 62.8 81 43.2
Oeu012463.1 Olea europaea HOM05D000014 ORTHO05D000016 2.9e-08 62.8 73 39.7
Oeu014159.1 Olea europaea HOM05D000014 ORTHO05D000016 2.9e-08 62.8 73 39.7
Oeu050542.1 Olea europaea HOM05D000014 ORTHO05D000016 2.9e-08 62.8 73 39.7
Oeu062184.1 Olea europaea HOM05D000014 ORTHO05D000016 2.9e-08 62.8 73 39.7
Ah.01g016530 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.8e-08 62.4 78 38.5
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 3.8e-08 62.4 73 39.7
THA.LOC104814761 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.8e-08 62.4 136 30.1
COL.COLO4_16290 Corchorus olitorius HOM05D000014 ORTHO05D000016 4.9e-08 62.0 128 25.8
FvH4_6g23372 Fragaria vesca HOM05D000014 ORTHO05D000016 4.9e-08 62.0 117 31.6
THA.LOC104803470 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.9e-08 62.0 112 32.1
ECA236G3420 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.5e-08 61.6 120 32.5
Ah.03g143610 Amaranthus hybridus HOM05D000014 ORTHO05D000016 8.4e-08 61.2 76 32.9
Oeu012510.1 Olea europaea HOM05D000014 ORTHO05D000016 8.4e-08 61.2 73 38.4
PSO017G2550 Papaver somniferum HOM05D000014 ORTHO05D000016 8.4e-08 61.2 141 28.4
THA.LOC104825339 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 8.4e-08 61.2 112 31.2
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-07 60.8 120 30.8
Oeu032575.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-07 60.8 75 37.3
Oeu055325.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-07 60.8 73 38.4
PSO675G4146 Papaver somniferum HOM05D000014 ORTHO05D000016 1.1e-07 60.8 80 36.2
THA.LOC109116812 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.1e-07 60.8 112 31.2
PSO063G2020 Papaver somniferum HOM05D000014 ORTHO05D000016 1.9e-07 60.1 150 30.7
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 2.5e-07 59.7 125 27.2
PSO674G0086 Papaver somniferum HOM05D000014 ORTHO05D000016 2.5e-07 59.7 80 36.2
THA.LOC104799779 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.5e-07 59.7 80 35.0
THA.LOC104808343 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.5e-07 59.7 112 30.4
Atru.chr4.757 Acer truncatum HOM05D000014 ORTHO05D000016 3.2e-07 59.3 74 35.1
Atru.chr4.763 Acer truncatum HOM05D000014 ORTHO05D000016 3.2e-07 59.3 74 35.1
Aa31sc576G20 Aethionema arabicum HOM05D011547 ORTHO05D000016 3.2e-07 59.3 35 68.6
ECA232G3605 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.2e-07 59.3 120 32.5
ECA234G1330 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.2e-07 59.3 120 32.5
ECA248G3844 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.2e-07 59.3 120 32.5
Oeu010981.1 Olea europaea HOM05D000014 ORTHO05D000016 3.2e-07 59.3 77 36.4
THA.LOC104818147 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.2e-07 59.3 80 35.0
Ca_11684_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.2e-07 58.9 72 40.3
Ca_30791_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.2e-07 58.9 72 40.3
ECA233G0374 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.2e-07 58.9 120 32.5
ECA233G2536 Erigeron canadensis HOM05D000508 ORTHO05D000093 4.2e-07 58.9 132 31.1
ECA246G0248 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.2e-07 58.9 111 32.4
Oeu007323.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-07 58.9 72 37.5
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 5.5e-07 58.5 79 31.6
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 5.5e-07 58.5 73 38.4
Oeu059601.1 Olea europaea HOM05D000014 ORTHO05D000016 5.5e-07 58.5 73 37.0
Ah.05g175580 Amaranthus hybridus HOM05D000014 ORTHO05D000016 7.1e-07 58.2 81 33.3
ECA232G1971 Erigeron canadensis HOM05D000014 ORTHO05D000016 7.1e-07 58.2 111 32.4
PSO017G4594 Papaver somniferum HOM05D000014 ORTHO05D000016 7.1e-07 58.2 127 32.3
TWI36G0746 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.1e-07 58.2 77 35.1
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 9.3e-07 57.8 79 31.6
CANSAT54G0792 Cannabis sativa HOM05D000014 ORTHO05D000016 9.3e-07 57.8 79 31.6
CANSAT78G1031 Cannabis sativa HOM05D000014 ORTHO05D000016 9.3e-07 57.8 79 31.6
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 9.3e-07 57.8 127 26.8
Oeu015290.1 Olea europaea HOM05D000014 ORTHO05D000016 9.3e-07 57.8 75 36.0
PSO339G1122 Papaver somniferum HOM05D000014 ORTHO05D000016 9.3e-07 57.8 78 35.9
PSO339G5834 Papaver somniferum HOM05D000014 ORTHO05D000016 9.3e-07 57.8 78 38.5
CANSAT25G2739 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-06 57.4 77 32.5
CANSAT80G0547 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-06 57.4 79 30.4
ECA238G1304 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.2e-06 57.4 120 31.7
ECA238G2268 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.2e-06 57.4 101 29.7
ECA238G3116 Erigeron canadensis HOM05D000014 ORTHO05D000016 1.2e-06 57.4 111 31.5
Manes.17G016450 Manihot esculenta HOM05D000014 ORTHO05D000016 1.2e-06 57.4 106 34.0
Oeu045340.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 57.4 73 35.6
PSO017G3975 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-06 57.4 119 27.7
PSO832G2079 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-06 57.4 119 27.7
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 1.2e-06 57.4 82 30.5
Ah.11g042020 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.6e-06 57.0 60 40.0
arahy.Tifrunner.gnm1.ann1.2F14L2 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.6e-06 57.0 77 37.7
arahy.Tifrunner.gnm1.ann1.M79Q51 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.6e-06 57.0 127 30.7
CANSAT01G1538 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-06 57.0 77 32.5
CANSAT78G0106 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-06 57.0 79 31.6
ECA234G1585 Erigeron canadensis HOM05D000014 ORTHO05D000016 1.6e-06 57.0 63 42.9
ECA236G3031 Erigeron canadensis HOM05D000014 ORTHO05D000016 1.6e-06 57.0 119 26.1
TWI63G1826 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.6e-06 57.0 77 35.1
TWI77G0341 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.6e-06 57.0 76 34.2
Ah.09g227080 Amaranthus hybridus HOM05D000014 ORTHO05D000016 2.1e-06 56.6 81 32.1
arahy.Tifrunner.gnm1.ann1.EQB169 Arachis hypogaea HOM05D000014 ORTHO05D000016 2.1e-06 56.6 77 39.0
arahy.Tifrunner.gnm1.ann1.HP9FM7 Arachis hypogaea HOM05D000014 ORTHO05D000016 2.1e-06 56.6 77 37.7
CANSAT78G1382 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-06 56.6 79 30.4
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-06 56.6 79 31.6
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-06 56.6 79 31.6
ECA233G3560 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.1e-06 56.6 73 37.0
PSO063G4722 Papaver somniferum HOM05D000014 ORTHO05D000016 2.1e-06 56.6 78 37.2
THA.LOC104810244 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.1e-06 56.6 78 33.3
CANSAT01G2079 Cannabis sativa HOM05D000014 ORTHO05D000016 2.7e-06 56.2 79 30.4
CANSAT01G3096 Cannabis sativa HOM05D000014 ORTHO05D000016 2.7e-06 56.2 107 28.0
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 2.7e-06 56.2 79 31.6
ECA247G0227 Erigeron canadensis HOM05D000014 ORTHO05D000016 2.7e-06 56.2 119 25.2
Oeu053640.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 56.2 73 38.4
PSO017G4171 Papaver somniferum HOM05D000014 ORTHO05D000016 2.7e-06 56.2 122 28.7
PSO063G5685 Papaver somniferum HOM05D000014 ORTHO05D000016 2.7e-06 56.2 80 35.0
THA.LOC104825201 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.7e-06 56.2 110 30.9
arahy.Tifrunner.gnm1.ann1.81QANW Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-06 55.8 123 29.3
arahy.Tifrunner.gnm1.ann1.I9FKSU Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-06 55.8 77 37.7
arahy.Tifrunner.gnm1.ann1.LW0R14 Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-06 55.8 77 37.7
arahy.Tifrunner.gnm1.ann1.TNV6EF Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-06 55.8 90 34.4
arahy.Tifrunner.gnm1.ann1.X5U67K Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-06 55.8 90 34.4
arahy.Tifrunner.gnm1.ann1.YYP60T Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-06 55.8 77 37.7
CANSAT11G1067 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-06 55.8 120 28.3
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-06 55.8 79 30.4
ECA233G1419 Erigeron canadensis HOM05D008498 ORTHO05D002071 3.5e-06 55.8 119 25.2
ECA238G1565 Erigeron canadensis HOM05D000014 ORTHO05D000016 3.5e-06 55.8 105 28.6
ECA240G1858 Erigeron canadensis HOM05D000014 ORTHO05D000016 3.5e-06 55.8 116 30.2
FvH4_6g22851 Fragaria vesca HOM05D000014 ORTHO05D000016 3.5e-06 55.8 78 32.1
PSO210G2460 Papaver somniferum HOM05D000014 ORTHO05D000016 3.5e-06 55.8 131 29.0
arahy.Tifrunner.gnm1.ann1.Q1F4QQ Arachis hypogaea HOM05D000014 ORTHO05D000016 4.6e-06 55.5 77 37.7
CANSAT21G0978 Cannabis sativa HOM05D000014 ORTHO05D000016 4.6e-06 55.5 120 28.3
CANSAT56G4502 Cannabis sativa HOM05D000014 ORTHO05D000016 4.6e-06 55.5 123 26.8
Ca_27479_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.6e-06 55.5 78 35.9
ECA232G1088 Erigeron canadensis HOM05D000014 ORTHO05D000016 4.6e-06 55.5 119 25.2
ECA232G2394 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.6e-06 55.5 74 35.1
ECA240G3041 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.6e-06 55.5 111 30.6
ECA246G2918 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.6e-06 55.5 118 30.5
QL09p053650 Quercus lobata HOM05D000014 ORTHO05D000093 4.6e-06 55.5 82 29.3
Ah.05g176490 Amaranthus hybridus HOM05D000014 ORTHO05D000016 6.0e-06 55.1 81 30.9
CSS0040149 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 6.0e-06 55.1 83 31.3
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 6.0e-06 55.1 119 28.6
CANSAT21G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 6.0e-06 55.1 64 35.9
Ca_23138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.0e-06 55.1 78 34.6
ECA236G2844 Erigeron canadensis HOM05D000014 ORTHO05D000016 6.0e-06 55.1 117 26.5
TPR.G20022 Trifolium pratense HOM05D000014 ORTHO05D000016 6.0e-06 55.1 115 28.7
Ah.08g223500 Amaranthus hybridus HOM05D000014 ORTHO05D000016 7.9e-06 54.7 80 32.5
arahy.Tifrunner.gnm1.ann1.Q96CMM Arachis hypogaea HOM05D000014 ORTHO05D000016 7.9e-06 54.7 77 40.3
CANSAT11G1889 Cannabis sativa HOM05D000014 ORTHO05D000016 7.9e-06 54.7 117 28.2
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 7.9e-06 54.7 82 28.0
CANSAT78G1747 Cannabis sativa HOM05D000014 ORTHO05D000016 7.9e-06 54.7 75 30.7
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 7.9e-06 54.7 73 37.0
ECA232G0104 Erigeron canadensis HOM05D000014 ORTHO05D000016 7.9e-06 54.7 120 30.8
ECA233G1795 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.9e-06 54.7 111 31.5
Oeu011846.1 Olea europaea HOM05D000014 ORTHO05D000016 7.9e-06 54.7 112 30.4
Oeu029291.1 Olea europaea HOM05D000014 ORTHO05D000016 7.9e-06 54.7 77 32.5
Oeu059205.1 Olea europaea HOM05D000014 ORTHO05D000016 7.9e-06 54.7 78 34.6
PSO210G5201 Papaver somniferum HOM05D000014 ORTHO05D000016 7.9e-06 54.7 65 40.0
THA.LOC104803350 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 7.9e-06 54.7 112 28.6
TWI14G0357 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 7.9e-06 54.7 77 33.8


User provided reference genes

Program Settings