Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.3e-97 359.8 186 100.0
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 3.8e-33 145.6 95 80.0
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.1e-32 144.1 95 78.9
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.5e-32 143.7 95 78.9
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 2.5e-32 142.9 111 69.4
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 3.2e-32 142.5 95 83.2
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 4.2e-32 142.1 94 78.7
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.6e-31 140.2 95 76.8
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.6e-31 140.2 95 76.8
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.6e-31 140.2 95 76.8
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 2.1e-31 139.8 95 76.8
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.1e-31 139.8 95 76.8
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 2.7e-31 139.4 95 75.8
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.7e-31 139.4 95 76.8
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 6.1e-31 138.3 95 75.8
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 6.1e-31 138.3 99 73.7
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 1.4e-30 137.1 95 74.7
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 3.0e-30 136.0 95 74.7
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 4.0e-30 135.6 95 74.7
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 4.0e-30 135.6 95 75.8
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 5.2e-30 135.2 95 72.6
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 6.8e-30 134.8 95 73.7
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 8.8e-30 134.4 95 75.8
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.0e-29 133.3 95 73.7
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 2.0e-29 133.3 95 74.7
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.0e-29 133.3 140 55.0
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 2.0e-29 133.3 95 71.6
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 2.0e-29 133.3 95 71.6
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 2.0e-29 133.3 95 74.7
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 2.6e-29 132.9 95 73.7
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 2.6e-29 132.9 95 74.7
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 3.4e-29 132.5 95 71.6
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 3.4e-29 132.5 102 68.6
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 4.4e-29 132.1 95 73.7
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 5.7e-29 131.7 95 72.6
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 5.7e-29 131.7 95 72.6
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 5.7e-29 131.7 95 72.6
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 5.7e-29 131.7 95 72.6
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.7e-29 131.7 95 70.5
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 7.5e-29 131.3 95 71.6
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 1.7e-28 130.2 95 68.4
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 2.2e-28 129.8 95 70.5
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 2.2e-28 129.8 95 71.6
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 2.2e-28 129.8 95 69.5
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 2.2e-28 129.8 105 64.8
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 2.8e-28 129.4 95 72.6
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 2.8e-28 129.4 95 72.6
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 3.7e-28 129.0 95 69.5
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 6.3e-28 128.3 95 70.5
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 6.3e-28 128.3 95 68.4
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 8.3e-28 127.9 94 70.2
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 8.3e-28 127.9 95 70.5
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 1.1e-27 127.5 95 71.6
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 1.1e-27 127.5 95 68.4
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.1e-27 127.5 95 69.5
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.1e-27 127.5 95 68.4
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 1.1e-27 127.5 95 68.4
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 1.4e-27 127.1 95 69.5
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.8e-27 126.7 95 68.4
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 1.8e-27 126.7 95 69.5
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 3.1e-27 125.9 95 66.3
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 5.4e-27 125.2 95 68.4
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 9.1e-27 124.4 95 66.3
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 1.2e-26 124.0 95 66.3
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 1.2e-26 124.0 95 65.3
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 1.2e-26 124.0 95 67.4
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 3.5e-26 122.5 95 69.5
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 3.5e-26 122.5 96 66.7
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 4.5e-26 122.1 95 67.4
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 1.0e-25 120.9 95 65.3
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 1.0e-25 120.9 95 65.3
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 2.3e-25 119.8 96 68.8
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.3e-25 119.8 96 68.8
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 2.3e-25 119.8 121 57.9
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 2.3e-25 119.8 95 66.3
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 2.9e-25 119.4 95 64.2
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 8.6e-25 117.9 95 63.2
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 1.1e-24 117.5 93 63.4
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.9e-24 116.7 105 59.0
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 1.9e-24 116.7 95 63.2
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 2.5e-24 116.3 95 66.3
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 3.3e-24 115.9 96 65.6
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 3.3e-24 115.9 96 65.6
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 7.2e-24 114.8 149 49.7
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 6.1e-23 111.7 95 62.1
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 3.0e-22 109.4 95 61.1
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 4.0e-22 109.0 111 55.0
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.4e-21 105.9 74 73.0
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.4e-21 105.9 74 73.0
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 3.4e-21 105.9 79 67.1
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 5.4e-19 98.6 161 42.2
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 2.7e-18 96.3 66 75.8
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 1.3e-17 94.0 94 52.1
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 4.0e-14 82.4 60 66.7
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 4.0e-14 82.4 65 67.7
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 7.5e-13 78.2 68 57.4
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 1.2e-07 60.8 49 63.3
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 3.1e-06 56.2 34 76.5


User provided reference genes

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