Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc1035G10 Aethionema arabicum HOM05D002761 ORTHO05D003351 1.0e-34 149.4 72 100.0
Aa31LG7G6560 Aethionema arabicum HOM05D002761 ORTHO05D003351 5.7e-25 117.1 56 94.6
Sp1g20170 Schrenkiella parvula HOM05D002761 ORTHO05D003351 6.2e-24 113.6 56 89.3
A09p42070 Brassica napus HOM05D002761 ORTHO05D003351 2.4e-23 111.7 56 87.5
C05p21800 Brassica napus HOM05D002761 ORTHO05D003351 2.4e-23 111.7 56 87.5
BolC5t30873H Brassica oleracea HOM05D002761 ORTHO05D003351 2.4e-23 111.7 56 87.5
BraA09t39693Z Brassica rapa HOM05D002761 ORTHO05D003351 2.4e-23 111.7 56 87.5
Cpa.g.sc66.29 Carica papaya HOM05D002761 ORTHO05D003351 2.6e-22 108.2 56 85.7
BcaC06g34983 Brassica carinata HOM05D002761 ORTHO05D003351 3.4e-22 107.8 56 85.7
A07p14260 Brassica napus HOM05D002761 ORTHO05D003351 3.4e-22 107.8 56 85.7
C07p20980 Brassica napus HOM05D002761 ORTHO05D003351 3.4e-22 107.8 56 85.7
BraA07t29183Z Brassica rapa HOM05D002761 ORTHO05D003351 3.4e-22 107.8 56 85.7
Atru.chr13.1730 Acer truncatum HOM05D002761 ORTHO05D003351 4.5e-22 107.5 56 85.7
Carub.0001s2218 Capsella rubella HOM05D002761 ORTHO05D003351 7.6e-22 106.7 56 83.9
Gohir.A05G250400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 7.6e-22 106.7 56 83.9
Gorai.009G263600 Gossypium raimondii HOM05D002761 ORTHO05D003351 7.6e-22 106.7 56 83.9
Thecc.08G185200 Theobroma cacao HOM05D002761 ORTHO05D003351 7.6e-22 106.7 56 83.9
AL1G36200 Arabidopsis lyrata HOM05D002761 ORTHO05D003351 1.0e-21 106.3 56 83.9
BcaB03g14191 Brassica carinata HOM05D002761 ORTHO05D003351 1.0e-21 106.3 56 83.9
BolC7t42629H Brassica oleracea HOM05D002761 ORTHO05D003351 1.0e-21 106.3 56 83.9
Ciclev10000691m.g Citrus clementina HOM05D002761 ORTHO05D003351 1.0e-21 106.3 56 83.9
Thhalv10007128m.g Eutrema salsugineum HOM05D002761 ORTHO05D003351 1.0e-21 106.3 56 83.9
Gohir.D05G253400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 1.7e-21 105.5 56 82.1
HPP92_003668 Vanilla planifolia HOM05D002761 ORTHO05D003351 1.7e-21 105.5 59 79.7
vmacro12482 Vaccinium macrocarpon HOM05D002761 ORTHO05D003351 2.2e-21 105.1 56 83.9
Nitab4.5_0001579g0100 Nicotiana tabacum HOM05D002761 ORTHO05D003351 2.9e-21 104.8 62 77.4
Aqoxy5G00310 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 3.8e-21 104.4 56 83.9
EL10Ac1g00094 Beta vulgaris HOM05D002761 ORTHO05D003351 3.8e-21 104.4 59 79.7
Oeu021213.2 Olea europaea HOM05D002761 ORTHO05D003351 3.8e-21 104.4 56 83.9
Oeu045162.1 Olea europaea HOM05D002761 ORTHO05D003351 3.8e-21 104.4 56 83.9
THA.LOC104809739 Tarenaya hassleriana HOM05D002761 ORTHO05D003351 3.8e-21 104.4 56 82.1
TWI34G1193 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 3.8e-21 104.4 56 83.9
AT1G22660 Arabidopsis thaliana HOM05D002761 ORTHO05D003351 5.0e-21 104.0 56 80.4
SHI09025 Sapria himalayana HOM05D002761 ORTHO05D003351 5.0e-21 104.0 57 80.7
Lj4A473G33 Lonicera japonica HOM05D002761 ORTHO05D003351 6.5e-21 103.6 69 71.0
SalBow7G0542 Salvia bowleyana HOM05D002761 ORTHO05D003351 6.5e-21 103.6 56 82.1
TWI60G0671 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 6.5e-21 103.6 56 83.9
Atru.chr4.2860 Acer truncatum HOM05D002761 ORTHO05D003351 8.4e-21 103.2 55 83.6
CSS0019088 Camellia sinensis var. sinensis HOM05D002761 ORTHO05D003351 8.4e-21 103.2 56 82.1
SGA_v2.0_scaffold118G32501 Striga asiatica HOM05D002761 ORTHO05D003351 8.4e-21 103.2 56 82.1
SGA_v2.0_scaffold24G10561 Striga asiatica HOM05D002761 ORTHO05D003351 8.4e-21 103.2 56 82.1
GSVIVG01034848001 Vitis vinifera HOM05D002761 ORTHO05D003351 8.4e-21 103.2 56 80.4
CsaV3_6G004730 Cucumis sativus L. HOM05D002761 ORTHO05D003351 1.1e-20 102.8 57 82.5
Dinv15069 Davidia involucrata HOM05D002761 ORTHO05D003351 1.1e-20 102.8 56 82.1
MBI16_g07686_MAGBIO Magnolia biondii HOM05D002761 ORTHO05D003351 1.4e-20 102.4 57 80.7
TAR381G1193 Trochodendron aralioides HOM05D002761 ORTHO05D003351 1.4e-20 102.4 56 83.9
AUR62022701 Chenopodium quinoa HOM05D002761 ORTHO05D003351 1.9e-20 102.1 58 79.3
ClCG08G008700 Citrullus lanatus HOM05D002761 ORTHO05D003351 1.9e-20 102.1 58 81.0
DCAR_001058 Daucus carota HOM05D002761 ORTHO05D003351 1.9e-20 102.1 56 82.1
PSO210G0794 Papaver somniferum HOM05D002761 ORTHO05D003351 1.9e-20 102.1 56 78.6
Actinidia23337 Actinidia chinensis HOM05D002761 ORTHO05D003351 2.5e-20 101.7 56 80.4
Lsat_1_v5_gn_6_104880 Lactuca sativa HOM05D002761 ORTHO05D003351 2.5e-20 101.7 56 80.4
Hund27091 Selenicereus undatus HOM05D002761 ORTHO05D003351 3.2e-20 101.3 56 82.1
MELO3C019943.2 Cucumis melo HOM05D002761 ORTHO05D003351 4.2e-20 100.9 57 80.7
HanXRQChr15g0490731 Helianthus annuus HOM05D002761 ORTHO05D003351 4.2e-20 100.9 56 80.4
Ah.05g178240 Amaranthus hybridus HOM05D002761 ORTHO05D003351 5.5e-20 100.5 56 78.6
Rhsim03G0083700 Rhododendron simsii HOM05D002761 ORTHO05D003351 5.5e-20 100.5 56 80.4
Hma1.2p1_0523F.1_g172030 Hydrangea macrophylla HOM05D002761 ORTHO05D003351 7.1e-20 100.1 56 80.4
Nn5g27660 Nelumbo nucifera HOM05D002761 ORTHO05D003351 7.1e-20 100.1 56 80.4
Thecc.10G143100 Theobroma cacao HOM05D002761 ORTHO05D003351 7.1e-20 100.1 56 78.6
CARHR023030 Cardamine hirsuta HOM05D002761 ORTHO05D003351 9.3e-20 99.8 56 76.8
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 9.3e-20 99.8 56 78.6
Lsat_1_v5_gn_4_165000 Lactuca sativa HOM05D002761 ORTHO05D003351 9.3e-20 99.8 56 78.6
HPP92_003659 Vanilla planifolia HOM05D002761 ORTHO05D003351 9.3e-20 99.8 56 78.6
Eucgr.F02738 Eucalyptus grandis HOM05D002761 ORTHO05D003351 1.2e-19 99.4 57 82.5
Nitab4.5_0000167g0140 Nicotiana tabacum HOM05D002761 ORTHO05D003351 1.2e-19 99.4 56 80.4
Sc01g0001830 Simmondsia chinensis HOM05D002761 ORTHO05D003351 1.2e-19 99.4 56 78.6
Cfa015122 Carpinus fangiana HOM05D002761 ORTHO05D003351 1.6e-19 99.0 57 78.9
CiPaw.05G166400 Carya illinoinensis HOM05D002761 ORTHO05D003351 1.6e-19 99.0 57 78.9
Eucgr.F02604 Eucalyptus grandis HOM05D002761 ORTHO05D003351 1.6e-19 99.0 57 82.5
Potri.013G111300 Populus trichocarpa HOM05D002761 ORTHO05D003351 1.6e-19 99.0 56 80.4
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 2.1e-19 98.6 56 76.8
Migut.C01266 Erythranthe guttata HOM05D002761 ORTHO05D003351 2.1e-19 98.6 56 78.6
Phvul.007G088400 Phaseolus vulgaris HOM05D002761 ORTHO05D003351 2.1e-19 98.6 57 80.7
PGR042G3223 Punica granatum HOM05D002761 ORTHO05D003351 2.1e-19 98.6 57 82.5
QL08p012793 Quercus lobata HOM05D002761 ORTHO05D003351 2.1e-19 98.6 61 75.4
PSO832G2735 Papaver somniferum HOM05D002761 ORTHO05D003351 2.7e-19 98.2 56 76.8
Solyc11g018770.3 Solanum lycopersicum HOM05D002761 ORTHO05D003351 2.7e-19 98.2 56 78.6
Sopen11g009830 Solanum pennellii HOM05D002761 ORTHO05D003351 2.7e-19 98.2 56 78.6
Sopen11g009950 Solanum pennellii HOM05D002761 ORTHO05D003351 2.7e-19 98.2 56 78.6
CAN.G761.16 Capsicum annuum HOM05D002761 ORTHO05D003351 3.5e-19 97.8 56 78.6
Cc10_g11590 Coffea canephora HOM05D002761 ORTHO05D003351 3.5e-19 97.8 56 76.8
Sed0000900 Sechium edule HOM05D002761 ORTHO05D003351 3.5e-19 97.8 57 78.9
CDE04G1174 Ceratophyllum demersum HOM05D002761 ORTHO05D003351 4.6e-19 97.4 56 78.6
Glyma.20G174400 Glycine max HOM05D002761 ORTHO05D003351 4.6e-19 97.4 57 80.7
Lalb_Chr06g0161951 Lupinus albus HOM05D002761 ORTHO05D003351 4.6e-19 97.4 57 78.9
Prupe.6G147900 Prunus persica HOM05D002761 ORTHO05D003351 4.6e-19 97.4 57 78.9
QL08p012947 Quercus lobata HOM05D002761 ORTHO05D003351 4.6e-19 97.4 61 75.4
Eucgr.F03976 Eucalyptus grandis HOM05D002761 ORTHO05D003351 6.1e-19 97.1 57 80.7
MD10G1052700 Malus domestica HOM05D002761 ORTHO05D003351 6.1e-19 97.1 57 78.9
QL03p042862 Quercus lobata HOM05D002761 ORTHO05D003351 6.1e-19 97.1 57 78.9
Aqoxy4G00115 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 7.9e-19 96.7 59 78.0
Lsat_1_v5_gn_3_10980 Lactuca sativa HOM05D000331 ORTHO05D000732 7.9e-19 96.7 58 74.1
Sed0017641 Sechium edule HOM05D002761 ORTHO05D003351 7.9e-19 96.7 57 77.2
CANSAT54G2022 Cannabis sativa HOM05D002761 ORTHO05D003351 1.0e-18 96.3 57 77.2
Eucgr.K02157 Eucalyptus grandis HOM05D002761 ORTHO05D003351 1.0e-18 96.3 57 80.7
VMungo0720G1634 Vigna mungo HOM05D002761 ORTHO05D003351 1.0e-18 96.3 57 78.9
Manes.18G102400 Manihot esculenta HOM05D002761 ORTHO05D003351 1.3e-18 95.9 56 76.8
Psat6g173240 Pisum sativum HOM05D002761 ORTHO05D003351 1.3e-18 95.9 57 78.9
TPR.G15701 Trifolium pratense HOM05D002761 ORTHO05D003351 1.3e-18 95.9 57 78.9
arahy.Tifrunner.gnm1.ann1.5UEM0D Arachis hypogaea HOM05D002761 ORTHO05D003351 1.8e-18 95.5 57 78.9
arahy.Tifrunner.gnm1.ann1.984TS9 Arachis hypogaea HOM05D002761 ORTHO05D003351 1.8e-18 95.5 57 78.9
arahy.Tifrunner.gnm1.ann1.Q9M74Z Arachis hypogaea HOM05D002761 ORTHO05D003351 1.8e-18 95.5 57 78.9
Glyma.10G217700 Glycine max HOM05D002761 ORTHO05D003351 1.8e-18 95.5 57 78.9
Peaxi162Scf01013g00232 Petunia axillaris HOM05D002761 ORTHO05D003351 1.8e-18 95.5 56 75.0
Zm00001eb408070 Zea mays HOM05D002761 ORTHO05D003351 1.8e-18 95.5 56 78.6
RcHm_v2.0_Chr4g0442691 Rosa chinensis HOM05D002761 ORTHO05D003351 3.0e-18 94.7 57 73.7
COL.COLO4_23637 Corchorus olitorius HOM05D002761 ORTHO05D003351 3.9e-18 94.4 57 75.4
Ca_10624_v3 Cicer arietinum L. HOM05D002761 ORTHO05D005716 6.7e-18 93.6 64 70.3
FvH4_4g33440 Fragaria vesca HOM05D002761 ORTHO05D003351 6.7e-18 93.6 57 73.7
FAN07G1831 Fragaria x ananassa HOM05D002761 ORTHO05D003351 6.7e-18 93.6 57 73.7
FAN12G1608 Fragaria x ananassa HOM05D002761 ORTHO05D003351 6.7e-18 93.6 57 73.7
FAN22G1178 Fragaria x ananassa HOM05D002761 ORTHO05D003351 6.7e-18 93.6 57 73.7
RcHm_v2.0_Chr4g0411681 Rosa chinensis HOM05D002761 ORTHO05D003351 6.7e-18 93.6 57 73.7
Medtr1g096870 Medicago truncatula HOM05D002761 ORTHO05D003351 1.1e-17 92.8 57 77.2
Os12g0171200 Oryza sativa ssp. japonica HOM05D002761 ORTHO05D003351 1.1e-17 92.8 56 73.2
MCO07G705 Micromonas commoda HOM05D002761 ORTHO05D003351 1.9e-17 92.0 56 73.2
Lj5g0020162 Lotus japonicus HOM05D002761 ORTHO05D003351 2.5e-17 91.7 57 78.9
ATR0584G032 Amborella trichopoda HOM05D002761 ORTHO05D003351 3.3e-17 91.3 56 76.8
RcHm_v2.0_Chr7g0192731 Rosa chinensis HOM05D002761 ORTHO05D003351 7.4e-17 90.1 57 71.9
unitig_747.g21798 Utricularia gibba HOM05D002761 ORTHO05D003351 7.4e-17 90.1 56 71.4
AagrBONN_evm.TU.Sc2ySwM_344.827 Anthoceros agrestis HOM05D002761 ORTHO05D003351 9.7e-17 89.7 56 75.0
AagrBONN_evm.TU.Sc2ySwM_117.2494 Anthoceros agrestis HOM05D002761 ORTHO05D003351 1.6e-16 89.0 56 75.0
FAN17G0376 Fragaria x ananassa HOM05D002761 ORTHO05D003351 2.8e-16 88.2 57 71.9
Lj5A633T18 Lonicera japonica HOM05D002761 ORTHO05D003351 4.8e-16 87.4 56 71.4
Lj5A655T26 Lonicera japonica HOM05D002761 ORTHO05D003351 4.8e-16 87.4 56 71.4
HanXRQChr14g0449031 Helianthus annuus HOM05D002761 ORTHO05D003351 6.3e-16 87.0 55 69.1
Lj5A657T12 Lonicera japonica HOM05D002761 ORTHO05D003351 6.3e-16 87.0 56 71.4
Lj8A206G29 Lonicera japonica HOM05D002761 ORTHO05D003351 1.1e-15 86.3 56 69.6
Lj5A650G23 Lonicera japonica HOM05D002761 ORTHO05D003351 1.4e-15 85.9 56 69.6
Lj5C648G5 Lonicera japonica HOM05D002761 ORTHO05D003351 1.4e-15 85.9 56 69.6
Lj5A652T14 Lonicera japonica HOM05D002761 ORTHO05D003351 1.8e-15 85.5 56 69.6
Pp3c4_17390 Physcomitrium patens HOM05D002761 ORTHO05D003351 1.8e-15 85.5 56 67.9
PSO063G6902 Papaver somniferum HOM05D002761 ORTHO05D003351 2.4e-15 85.1 56 67.9
PSO170G5134 Papaver somniferum HOM05D002761 ORTHO05D003351 3.1e-15 84.7 56 67.9
BcaC05g24852 Brassica carinata HOM05D002761 ORTHO05D003351 6.9e-15 83.6 55 70.9
C05p08980 Brassica napus HOM05D002761 ORTHO05D003351 6.9e-15 83.6 55 70.9
Lj5C636G2 Lonicera japonica HOM05D002761 ORTHO05D003351 6.9e-15 83.6 56 67.9
PRCOL_00003563 Prasinoderma coloniale HOM05D002761 ORTHO05D003351 6.9e-15 83.6 56 71.4
Mapoly0174s0023 Marchantia polymorpha HOM05D002761 ORTHO05D003351 1.2e-14 82.8 56 67.9
SMO172G0205 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 1.2e-14 82.8 57 66.7
BcaB08g37366 Brassica carinata HOM05D002761 ORTHO05D003351 5.9e-14 80.5 56 67.9
BcaC07g41804 Brassica carinata HOM05D002761 ORTHO05D003351 5.9e-14 80.5 56 67.9
Cre17.g726100 Chlamydomonas reinhardtii HOM05D002761 ORTHO05D003351 5.9e-14 80.5 56 64.3
arahy.Tifrunner.gnm1.ann1.8YT8MI Arachis hypogaea HOM05D002761 ORTHO05D003351 1.7e-13 79.0 57 68.4
arahy.Tifrunner.gnm1.ann1.SG3J5R Arachis hypogaea HOM05D002761 ORTHO05D003351 1.7e-13 79.0 57 68.4
Lj5A618G15 Lonicera japonica HOM05D002761 ORTHO05D003351 5.0e-13 77.4 70 57.1
arahy.Tifrunner.gnm1.ann1.3C4BUC Arachis hypogaea HOM05D002761 ORTHO05D003351 1.4e-12 75.9 57 66.7
Lj5A654G16 Lonicera japonica HOM05D002761 ORTHO05D003351 2.5e-12 75.1 77 51.9
HanXRQChr09g0263631 Helianthus annuus HOM05D002761 ORTHO05D003351 3.2e-12 74.7 44 72.7
PSO339G2349 Papaver somniferum HOM05D002761 ORTHO05D003351 5.5e-12 73.9 57 61.4
SMO111G0222 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 7.2e-12 73.6 57 61.4
SMO111G0069 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 9.4e-12 73.2 57 59.6
BcaC07g41808 Brassica carinata HOM05D002761 ORTHO05D032259 1.2e-11 72.8 57 61.4
SMO351G0639 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 1.2e-11 72.8 57 59.6
Lj5A658G21 Lonicera japonica HOM05D002761 ORTHO05D003351 1.6e-11 72.4 77 50.6
Medtr1g096810 Medicago truncatula HOM05D002761 ORTHO05D003351 2.1e-11 72.0 54 63.0
ECA238G1828 Erigeron canadensis HOM05D002761 ORTHO05D003351 2.7e-11 71.6 55 61.8
Lj5A669G11 Lonicera japonica HOM05D002761 ORTHO05D003351 1.8e-10 68.9 69 53.6
Zm00001eb267240 Zea mays HOM05D002761 ORTHO05D003351 1.8e-10 68.9 40 77.5
Cfa023620 Carpinus fangiana HOM05D002761 ORTHO05D003351 1.1e-09 66.2 56 55.4
Lsat_1_v5_gn_6_104920 Lactuca sativa HOM05D002761 ORTHO05D003351 1.1e-09 66.2 56 55.4
Lsat_1_v5_gn_4_165020 Lactuca sativa HOM05D002761 ORTHO05D003351 1.5e-09 65.9 56 55.4
Haze_01552 Corylus avellana HOM05D002761 ORTHO05D003351 3.3e-09 64.7 36 75.0
arahy.Tifrunner.gnm1.ann1.BB8XW9 Arachis hypogaea HOM05D002761 ORTHO05D003351 4.8e-08 60.8 45 66.7
Aqoxy1G03086 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 3.1e-07 58.2 34 70.6
Zm00001eb381950 Zea mays HOM05D002761 ORTHO05D003351 9.1e-07 56.6 34 73.5
Lj5A629T17 Lonicera japonica HOM05D002761 ORTHO05D003351 1.2e-06 56.2 38 65.8
CBR_g3548 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-06 55.8 39 64.1
Lj5A638G8 Lonicera japonica HOM05D002761 ORTHO05D003351 3.4e-06 54.7 73 45.2
Lj5A617G14 Lonicera japonica HOM05D002761 ORTHO05D003351 4.5e-06 54.3 37 64.9
A08p03170 Brassica napus HOM05D002761 ORTHO05D003351 5.9e-06 53.9 55 49.1
BraA08t32349Z Brassica rapa HOM05D002761 ORTHO05D003351 5.9e-06 53.9 55 49.1
Lj5A659G19 Lonicera japonica HOM05D002761 ORTHO05D018170 5.9e-06 53.9 39 61.5
RcHm_v2.0_Chr7g0217311 Rosa chinensis HOM05D002761 ORTHO05D003351 5.9e-06 53.9 31 64.5
Lj5A634G3 Lonicera japonica HOM05D002761 ORTHO05D003351 7.7e-06 53.5 39 61.5


User provided reference genes

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