Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc822G10 Aethionema arabicum HOM05D002660 ORTHO05D013121 3.8e-105 384.8 187 100.0
Lsat_1_v5_gn_8_93880 Lactuca sativa HOM05D002660 ORTHO05D013121 3.2e-19 99.4 155 33.5
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.6e-18 97.1 147 34.0
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 6.0e-18 95.1 109 36.7
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 7.3e-16 88.2 122 35.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 7.3e-16 88.2 122 35.2
arahy.Tifrunner.gnm1.ann1.QE2SNE Arachis hypogaea HOM05D002660 ORTHO05D013121 4.7e-15 85.5 104 33.7
Actinidia11788 Actinidia chinensis HOM05D002660 ORTHO05D013121 1.8e-14 83.6 99 37.4
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 1.2e-13 80.9 112 43.8
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 2.6e-13 79.7 104 46.2
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 2.6e-13 79.7 104 46.2
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 2.6e-13 79.7 104 46.2
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 2.6e-13 79.7 104 46.2
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 2.6e-13 79.7 104 46.2
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 2.6e-13 79.7 119 32.8
Actinidia34821 Actinidia chinensis HOM05D002660 ORTHO05D013121 3.4e-13 79.3 89 38.2
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 3.4e-13 79.3 93 39.8
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 1.3e-12 77.4 120 31.7
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 4.1e-11 72.4 114 30.7
Dinv06709 Davidia involucrata HOM05D002660 ORTHO05D013121 4.1e-11 72.4 127 29.9
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.6e-10 70.5 113 34.5
Lalb_Chr00c24g0406801 Lupinus albus HOM05D002660 ORTHO05D011807 2.7e-10 69.7 69 47.8
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 1.3e-09 67.4 107 30.8
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 1.3e-09 67.4 120 29.2
Sed0005389 Sechium edule HOM05D002660 ORTHO05D013121 3.0e-09 66.2 114 28.9
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-08 62.8 125 28.8
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-08 62.8 125 28.8
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-08 62.8 125 28.8
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-08 62.8 125 28.8
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.3e-08 62.8 125 28.8
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 7.3e-08 61.6 98 27.6
ATMG01130 Arabidopsis thaliana HOM05D002965 ORTHO05D011068 6.2e-07 58.5 31 90.3
Ca_07940_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 1.8e-06 57.0 107 29.9
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 4.0e-06 55.8 64 32.8
Ca_22174_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 6.8e-06 55.1 95 29.5


User provided reference genes

Program Settings