Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc798G10 Aethionema arabicum HOM05D003517 ORTHO05D009794 5.9e-74 280.8 144 100.0
ATMG00270 Arabidopsis thaliana HOM05D003517 ORTHO05D009794 2.2e-44 182.6 115 87.0
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus HOM05D003517 ORTHO05D009794 2.2e-44 182.6 115 87.0
BolSC28t60338H Brassica oleracea HOM05D003517 ORTHO05D009794 2.2e-44 182.6 115 87.0
BolSC28t60397H Brassica oleracea HOM05D003517 ORTHO05D009794 2.2e-44 182.6 115 87.0
BraSC77t46643Z Brassica rapa HOM05D003517 ORTHO05D009794 2.2e-44 182.6 115 87.0
CARHR282730 Cardamine hirsuta HOM05D003517 ORTHO05D009794 2.2e-44 182.6 115 87.0
CANSAT16G0040 Cannabis sativa HOM05D003517 ORTHO05D009794 8.3e-44 180.6 115 85.2
Sp3g25610 Schrenkiella parvula HOM05D003517 ORTHO05D009794 1.1e-43 180.3 115 86.1
CsaV3_UNG208670 Cucumis sativus L. HOM05D003517 ORTHO05D009794 2.4e-43 179.1 115 85.2
RcHm_v2.0_MTg0498991 Rosa chinensis HOM05D003517 ORTHO05D009794 2.4e-43 179.1 115 85.2
CSS0025973 Camellia sinensis var. sinensis HOM05D003517 ORTHO05D009794 3.2e-43 178.7 115 85.2
Nitab4.5_0003945g0090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.2e-43 178.7 100 92.0
Glyma.08G301000 Glycine max HOM05D003517 ORTHO05D009794 4.1e-43 178.3 115 85.2
Lj5g0026865 Lotus japonicus HOM05D003517 ORTHO05D009794 4.1e-43 178.3 115 85.2
LjContig00439g0001390 Lotus japonicus HOM05D003517 ORTHO05D009794 4.1e-43 178.3 115 85.2
LjContig00446g0016600 Lotus japonicus HOM05D003517 ORTHO05D009794 4.1e-43 178.3 115 85.2
Sed0011263 Sechium edule HOM05D003517 ORTHO05D009794 5.4e-43 177.9 115 84.3
Sed0015872 Sechium edule HOM05D003517 ORTHO05D009794 5.4e-43 177.9 115 84.3
HanXRQChr00c0234g0572741 Helianthus annuus HOM05D003517 ORTHO05D009794 1.2e-42 176.8 115 84.3
HanXRQMTg0579471 Helianthus annuus HOM05D003517 ORTHO05D009794 1.2e-42 176.8 115 84.3
HanXRQChr09g0237761 Helianthus annuus HOM05D003517 ORTHO05D009794 1.6e-42 176.4 115 83.5
Lalb_Chr00c21g0406031 Lupinus albus HOM05D003517 ORTHO05D009794 4.6e-42 174.9 115 83.5
Lalb_Chr00c39g0409031 Lupinus albus HOM05D003517 ORTHO05D009794 4.6e-42 174.9 115 83.5
Lalb_Chr00c39g0409211 Lupinus albus HOM05D003517 ORTHO05D009794 4.6e-42 174.9 115 83.5
Lalb_Chr00c51g0413121 Lupinus albus HOM05D003517 ORTHO05D009794 4.6e-42 174.9 115 83.5
HanXRQChr01g0013411 Helianthus annuus HOM05D003517 ORTHO05D009794 6.0e-42 174.5 115 83.5
Lj2P1233T102 Lonicera japonica HOM05D003517 ORTHO05D009794 6.0e-42 174.5 115 83.5
Lj2P1236T75 Lonicera japonica HOM05D003517 ORTHO05D009794 6.0e-42 174.5 115 83.5
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 1.3e-41 173.3 115 83.5
RhsimMtG0007100 Rhododendron simsii HOM05D003517 ORTHO05D009794 1.3e-41 173.3 115 84.3
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 1.7e-41 172.9 115 83.5
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.7e-41 172.9 115 83.5
Solyc00g021630.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 1.7e-41 172.9 115 83.5
Nn003s41395 Nelumbo nucifera HOM05D003517 ORTHO05D009794 2.3e-41 172.6 115 82.6
Nn1g09965 Nelumbo nucifera HOM05D003517 ORTHO05D009794 2.3e-41 172.6 115 82.6
Nn1g10124 Nelumbo nucifera HOM05D003517 ORTHO05D009794 2.3e-41 172.6 115 82.6
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea HOM05D003517 ORTHO05D009794 5.0e-41 171.4 118 80.5
HanXRQChr02g0049481 Helianthus annuus HOM05D003517 ORTHO05D009794 5.0e-41 171.4 115 82.6
Gohir.A03G108600 Gossypium hirsutum HOM05D003517 ORTHO05D009794 6.6e-41 171.0 115 83.5
Gorai.001G168000 Gossypium raimondii HOM05D003517 ORTHO05D009794 6.6e-41 171.0 115 83.5
Aqoxy38s018 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 2.5e-40 169.1 115 81.7
DCAR_032460 Daucus carota HOM05D003517 ORTHO05D009794 2.5e-40 169.1 115 81.7
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.1e-39 166.0 118 79.7
TPR.G40594 Trifolium pratense HOM05D003517 ORTHO05D009794 2.8e-39 165.6 109 83.5
SHI35306 Sapria himalayana HOM05D003517 ORTHO05D009794 4.7e-39 164.9 114 81.6
SHI49089 Sapria himalayana HOM05D003517 ORTHO05D009794 4.7e-39 164.9 114 81.6
SHI53309 Sapria himalayana HOM05D003517 ORTHO05D009794 1.4e-38 163.3 114 80.7
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 6.8e-38 161.0 115 78.3
CAN.G1.11 Capsicum annuum HOM05D003517 ORTHO05D009794 8.9e-38 160.6 115 76.5
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.9e-36 155.6 114 75.4
Nitab4.5_0000172g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.1e-35 153.7 115 73.0
LjContig00315g0004708 Lotus japonicus HOM05D003517 ORTHO05D009794 2.4e-35 152.5 115 76.5
HanXRQChr05g0138851 Helianthus annuus HOM05D003517 ORTHO05D009794 7.1e-35 151.0 102 81.4
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 4.6e-34 148.3 110 77.3
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.9e-33 145.2 115 71.3
Gohir.A08G086024 Gossypium hirsutum HOM05D003517 ORTHO05D009794 1.1e-32 143.7 115 72.2
BraSC159t45725Z Brassica rapa HOM05D003517 ORTHO05D009794 2.5e-32 142.5 75 100.0
Nitab4.5_0001152g0960 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.6e-31 139.8 112 68.8
VMungo0985G0003 Vigna mungo HOM05D003517 ORTHO05D009794 3.6e-31 138.7 78 94.9
Ca_03783_v3 Cicer arietinum L. HOM05D009973 ORTHO05D009794 1.4e-30 136.7 74 97.3
Actinidia34878 Actinidia chinensis HOM05D003517 ORTHO05D009794 3.1e-30 135.6 73 97.3
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 9.2e-27 124.0 75 89.3
Pp3c12_12240 Physcomitrium patens HOM05D003517 ORTHO05D009794 2.1e-26 122.9 115 62.6
SabraMtG0003300 Salix brachista HOM05D003517 ORTHO05D009794 3.5e-26 122.1 86 80.2
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 7.3e-24 114.4 72 87.5
Solyc10g045730.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 9.6e-24 114.0 100 68.0
CDE02G3221 Ceratophyllum demersum HOM05D003517 ORTHO05D009794 2.4e-22 109.4 85 72.9
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 1.3e-20 103.6 82 74.4
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 2.8e-15 85.9 52 88.5
SGA_v2.0_scaffold400G50848 Striga asiatica HOM05D003517 ORTHO05D009794 6.2e-15 84.7 46 97.8
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 1.1e-14 84.0 49 91.8
Sp5g20260 Schrenkiella parvula HOM05D003517 ORTHO05D009794 3.1e-14 82.4 72 68.1
Aqoxy12s041 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 1.2e-13 80.5 56 85.7
Psat0s1454g0040 Pisum sativum HOM05D003517 ORTHO05D009794 7.6e-13 77.8 48 89.6
Lj2P92T86 Lonicera japonica HOM05D003517 ORTHO05D009794 3.8e-12 75.5 61 70.5
HanXRQChr05g0138841 Helianthus annuus HOM05D003517 ORTHO05D009794 4.9e-12 75.1 42 90.5
HanXRQChr05g0138831 Helianthus annuus HOM05D003517 ORTHO05D009794 8.4e-12 74.3 37 97.3
HanXRQChr05g0138811 Helianthus annuus HOM05D003517 ORTHO05D009794 7.1e-11 71.2 37 94.6
HanXRQChr05g0138821 Helianthus annuus HOM05D003517 ORTHO05D009794 7.1e-11 71.2 37 94.6
Nitab4.5_0001152g0290 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.2e-10 70.5 48 77.1
Nitab4.5_0001152g0550 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.9e-09 65.5 57 64.9
Lsat_1_v5_gn_5_95761 Lactuca sativa HOM05D002069 ORTHO05D009794 2.5e-08 62.8 56 60.7


User provided reference genes

Program Settings