Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc22G100 Aethionema arabicum HOM05D000003 ORTHO05D000006 3.5e-73 278.1 130 100.0
Aa31LG4G9750 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-31 139.8 107 57.9
Aa31LG8G10190 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.3e-24 116.7 108 51.9
Aa31LG1G2320 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.0e-24 115.5 108 50.0
Aa31LG10G11440 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-16 88.2 108 36.1
Aa31LG9G4310 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-15 85.9 106 40.6
Aa31LG11G4990 Aethionema arabicum HOM05D000003 ORTHO05D000006 5.6e-15 84.7 105 35.2
Aa31sc224G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 3.4e-12 75.5 123 27.6
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 7.6e-12 74.3 123 31.7
Aa31LG4G16940 Aethionema arabicum HOM05D000003 ORTHO05D000006 8.4e-11 70.9 111 30.6
Aa31LG9G2500 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-10 70.1 104 31.7
CANSAT21G0612 Cannabis sativa HOM05D000003 ORTHO05D000006 2.4e-10 69.3 123 31.7
BraA02t08061Z Brassica rapa HOM05D000003 ORTHO05D000006 4.2e-10 68.6 109 36.7
Aa31sc329G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-10 68.2 95 34.7
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 7.1e-10 67.8 121 27.3
CSS0044337 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-09 65.9 128 29.7
BcaB02g11235 Brassica carinata HOM05D000003 ORTHO05D000007 3.5e-09 65.5 113 31.9
CANSAT21G1528 Cannabis sativa HOM05D000003 ORTHO05D000006 1.0e-08 63.9 123 30.9
THA.LOC104803349 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.0e-08 63.9 107 29.9
BcaC05g25227 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-08 63.5 116 30.2
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-08 63.5 122 31.1
BcaC02g12080 Brassica carinata HOM05D000003 ORTHO05D000006 1.7e-08 63.2 118 30.5
BraA05t21357Z Brassica rapa HOM05D000003 ORTHO05D000006 1.7e-08 63.2 101 34.7
Oeu018937.1 Olea europaea HOM05D000003 ORTHO05D000006 3.0e-08 62.4 91 35.2
CANSAT35G1349 Cannabis sativa HOM05D000003 ORTHO05D000006 3.9e-08 62.0 125 29.6
Dinv12857 Davidia involucrata HOM05D000003 ORTHO05D000006 6.6e-08 61.2 122 29.5
THA.LOC104798680 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.6e-08 61.2 121 28.9
Atru.chr5.2031 Acer truncatum HOM05D000003 ORTHO05D000006 8.7e-08 60.8 118 29.7
BcaC01g04543 Brassica carinata HOM05D000848 ORTHO05D003342 8.7e-08 60.8 126 31.7
BcaC06g36724 Brassica carinata HOM05D000003 ORTHO05D000006 8.7e-08 60.8 107 28.0
BolC3t19284H Brassica oleracea HOM05D000003 ORTHO05D000006 8.7e-08 60.8 117 31.6
CANSAT64G1538 Cannabis sativa HOM05D000003 ORTHO05D000006 8.7e-08 60.8 123 30.1
Dinv13083 Davidia involucrata HOM05D007604 ORTHO05D008966 8.7e-08 60.8 118 29.7
BcaB01g03209 Brassica carinata HOM05D000003 ORTHO05D000006 1.5e-07 60.1 122 27.9
BcaC07g37192 Brassica carinata HOM05D000003 ORTHO05D000006 1.5e-07 60.1 107 33.6
Dinv10916 Davidia involucrata HOM05D000003 ORTHO05D000006 1.5e-07 60.1 121 28.9
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 1.9e-07 59.7 114 31.6
BcaC07g39441 Brassica carinata HOM05D000003 ORTHO05D000006 1.9e-07 59.7 125 29.6
CANSAT35G1573 Cannabis sativa HOM05D000003 ORTHO05D000006 1.9e-07 59.7 123 27.6
CANSAT78G2454 Cannabis sativa HOM05D000003 ORTHO05D000006 1.9e-07 59.7 123 26.8
Dinv18035 Davidia involucrata HOM05D000003 ORTHO05D000006 1.9e-07 59.7 121 28.9
Oeu027287.1 Olea europaea HOM05D000003 ORTHO05D000006 1.9e-07 59.7 94 35.1
CANSAT25G1474 Cannabis sativa HOM05D000003 ORTHO05D000006 2.5e-07 59.3 107 29.0
PSO170G0886 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-07 59.3 122 31.1
BcaB01g02253 Brassica carinata HOM05D000003 ORTHO05D000006 3.3e-07 58.9 123 24.4
CSS0028930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-07 58.9 122 28.7
CANSAT54G2921 Cannabis sativa HOM05D000003 ORTHO05D000006 3.3e-07 58.9 93 30.1
BraA01t00774Z Brassica rapa HOM05D000003 ORTHO05D021943 4.3e-07 58.5 78 39.7
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 4.3e-07 58.5 123 28.5
CANSAT54G2584 Cannabis sativa HOM05D000003 ORTHO05D000006 4.3e-07 58.5 131 26.7
Dinv20814 Davidia involucrata HOM05D000003 ORTHO05D000006 4.3e-07 58.5 124 30.6
BcaC06g35997 Brassica carinata HOM05D000003 ORTHO05D003342 5.6e-07 58.2 121 28.1
BolC5t30983H Brassica oleracea HOM05D000003 ORTHO05D000006 5.6e-07 58.2 107 29.0
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 5.6e-07 58.2 122 27.9
CANSAT01G3208 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-07 58.2 83 36.1
BolC8t50096H Brassica oleracea HOM05D000003 ORTHO05D000006 7.3e-07 57.8 107 29.9
CANSAT25G0549 Cannabis sativa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 79 35.4
Dinv22914 Davidia involucrata HOM05D000003 ORTHO05D000006 7.3e-07 57.8 80 37.5
Potri.004G128860 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 121 28.9
Potri.004G128880 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 121 28.9
Potri.004G128901 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 121 28.9
Potri.004G128921 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 121 28.9
Potri.004G128941 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 121 28.9
Potri.004G128961 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 121 28.9
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 9.6e-07 57.4 107 29.9
CSS0015987 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.6e-07 57.4 107 30.8
CANSAT11G0356 Cannabis sativa HOM05D000003 ORTHO05D000006 9.6e-07 57.4 123 26.8
Potri.005G151275 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.6e-07 57.4 121 28.9
SHI27425 Sapria himalayana HOM05D000003 ORTHO05D000004 9.6e-07 57.4 123 26.0
Aa31LG9G11500 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 108 27.8
CANSAT25G0109 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-06 57.0 123 25.2
Potri.003G047001 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.3e-06 57.0 121 28.9
SHI10793 Sapria himalayana HOM05D000003 ORTHO05D000004 1.3e-06 57.0 124 27.4
THA.LOC104825266 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 1.3e-06 57.0 115 27.8
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-06 56.6 107 29.0
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-06 56.6 130 27.7
CANSAT78G0139 Cannabis sativa HOM05D000003 ORTHO05D000006 1.6e-06 56.6 123 26.8
Oeu018763.1 Olea europaea HOM05D000003 ORTHO05D000006 1.6e-06 56.6 74 36.5
CANSAT21G0605 Cannabis sativa HOM05D000003 ORTHO05D000006 2.1e-06 56.2 123 26.8
vmacro06921 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 2.1e-06 56.2 87 33.3
Atru.chr2.1806 Acer truncatum HOM05D000003 ORTHO05D000006 2.8e-06 55.8 107 29.9
A03p34860 Brassica napus HOM05D000003 ORTHO05D000007 2.8e-06 55.8 119 27.7
Nitab4.5_0000835g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.8e-06 55.8 74 35.1
Oeu014514.1 Olea europaea HOM05D000003 ORTHO05D000006 3.6e-06 55.5 87 35.6
PSO648G0125 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 55.5 100 31.0
Aa31LG1G7070 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.8e-06 55.1 62 38.7
Aa31sc251G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.8e-06 55.1 65 36.9
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 4.8e-06 55.1 107 29.0
Dinv19394 Davidia involucrata HOM05D000243 ORTHO05D000007 4.8e-06 55.1 119 29.4
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 6.2e-06 54.7 122 27.9
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 6.2e-06 54.7 111 31.5
BraA10t44622Z Brassica rapa HOM05D000003 ORTHO05D000006 6.2e-06 54.7 98 32.7
Dinv31288 Davidia involucrata HOM05D000003 ORTHO05D000006 6.2e-06 54.7 123 29.3
PSO170G5559 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 54.7 107 29.9
Aa31sc465G50 Aethionema arabicum HOM05D000003 ORTHO05D000006 8.1e-06 54.3 65 35.4
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 8.1e-06 54.3 121 29.8


User provided reference genes

Program Settings