Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc1168G40 Aethionema arabicum HOM05D008204 ORTHO05D010378 1.9e-24 115.2 64 100.0
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 1.9e-24 115.2 64 100.0
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 1.9e-24 115.2 64 100.0
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 1.9e-24 115.2 64 100.0
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 5.6e-24 113.6 64 98.4
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 5.6e-24 113.6 64 98.4
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 5.6e-24 113.6 64 98.4
Lsat_1_v5_gn_5_43061 Lactuca sativa HOM05D008204 ORTHO05D010378 2.8e-23 111.3 63 96.8
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 4.7e-23 110.5 64 96.9
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 4.7e-23 110.5 64 96.9
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 4.7e-23 110.5 64 96.9
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 8.0e-23 109.8 64 96.9
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 1.0e-22 109.4 64 95.3
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 1.0e-22 109.4 63 96.8
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 3.0e-22 107.8 63 95.2
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 5.2e-22 107.1 63 95.2
Potri.007G061661 Populus trichocarpa HOM05D008204 ORTHO05D010378 5.2e-22 107.1 64 93.8
Potri.007G062622 Populus trichocarpa HOM05D008204 ORTHO05D010378 5.2e-22 107.1 64 93.8
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 6.8e-22 106.7 63 93.7
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.2e-21 105.9 63 93.7
Ah.10g028140 Amaranthus hybridus HOM05D008204 ORTHO05D010378 1.2e-21 105.9 63 93.7
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 1.5e-21 105.5 64 93.8
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 2.6e-21 104.8 63 93.7
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 3.4e-21 104.4 63 93.7
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 3.4e-21 104.4 63 93.7
SHI41393 Sapria himalayana HOM05D008204 ORTHO05D010378 3.4e-21 104.4 63 88.9
CANSAT16G0035 Cannabis sativa HOM05D008204 ORTHO05D010378 7.5e-21 103.2 64 92.2
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 7.5e-21 103.2 64 92.2
Sed0011989 Sechium edule HOM05D008204 ORTHO05D010378 7.5e-21 103.2 64 92.2
Sed0024014 Sechium edule HOM05D008204 ORTHO05D010378 7.5e-21 103.2 64 92.2
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 9.8e-21 102.8 63 92.1
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 1.1e-19 99.4 61 91.8
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 3.5e-18 94.4 52 100.0
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 1.3e-17 92.4 51 100.0
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 1.3e-17 92.4 54 96.3
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.3e-17 92.4 54 96.3
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.3e-17 92.4 54 96.3
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 3.9e-17 90.9 60 85.0
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 5.6e-16 87.0 63 84.1
PSO764G0230 Papaver somniferum HOM05D017042 ORTHO05D018469 3.6e-15 84.3 55 83.6
BraSC54t46364Z Brassica rapa HOM05D008204 ORTHO05D010378 4.7e-15 84.0 46 100.0
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 6.2e-15 83.6 45 100.0
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 6.2e-15 83.6 45 100.0
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 8.0e-15 83.2 50 94.0
SEGI_24171 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 1.2e-13 79.3 63 76.2
HanXRQChr07g0189011 Helianthus annuus HOM05D008204 ORTHO05D010378 1.5e-13 79.0 47 93.6
unitig_87.g27951 Utricularia gibba HOM05D008204 ORTHO05D010378 2.2e-12 75.1 45 93.3
SHI54418 Sapria himalayana HOM05D008204 ORTHO05D010378 8.3e-12 73.2 44 93.2
HanXRQChr11g0327851 Helianthus annuus HOM05D008204 ORTHO05D010378 9.2e-11 69.7 42 92.9
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 9.2e-11 69.7 41 95.1
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 1.2e-10 69.3 50 78.0
Mapoly0002s0163 Marchantia polymorpha HOM05D008204 ORTHO05D010378 1.0e-09 66.2 45 82.2
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.3e-09 65.9 49 75.5
Nitab4.5_0000172g1780 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.1e-08 62.8 43 81.4
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 5.6e-08 60.5 49 75.5
Nitab4.5_0001152g0280 Nicotiana tabacum HOM05D008204 ORTHO05D016167 1.8e-06 55.5 37 81.1


User provided reference genes

Program Settings