Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 1.2e-283 979.2 485 100.0
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 2.6e-246 855.1 485 89.5
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 9.7e-246 853.2 485 89.3
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 9.7e-246 853.2 485 89.3
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 2.4e-244 848.6 485 88.9
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 1.2e-240 836.3 474 89.2
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 7.2e-233 810.4 487 85.2
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 1.6e-227 792.7 474 85.7
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.8e-223 779.2 591 70.6
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 1.7e-221 772.7 645 66.5
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 2.8e-216 755.4 530 75.1
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 2.3e-215 752.3 485 81.9
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 4.0e-215 751.5 485 80.2
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 1.5e-214 749.6 486 80.9
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 8.3e-213 743.8 567 71.3
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 4.3e-209 731.5 453 83.4
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 9.5e-209 730.3 532 73.3
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.6e-208 728.4 591 67.2
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 8.9e-207 723.8 479 80.0
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 1.6e-203 713.0 445 83.1
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 4.6e-203 711.4 490 76.5
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 2.9e-197 692.2 475 76.4
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.4e-196 689.9 455 79.1
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 4.3e-193 678.3 560 65.9
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 8.7e-178 627.5 409 79.0
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.5e-177 625.9 474 70.5
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 1.2e-174 617.1 484 70.0
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 3.3e-169 599.0 451 71.2
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 1.6e-168 596.7 415 76.9
BolSC28t60411H Brassica oleracea HOM05D003430 ORTHO05D004809 2.9e-157 559.3 284 98.6
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 1.9e-156 556.6 484 65.3
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 2.5e-153 546.2 604 54.5
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 1.0e-149 534.3 487 61.4
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 1.0e-149 534.3 476 64.9
Sp3g25650 Schrenkiella parvula HOM05D003430 ORTHO05D004809 8.5e-141 504.6 284 90.8
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.1e-139 500.0 407 67.3
Lj2C1222G64 Lonicera japonica HOM05D003430 ORTHO05D004809 5.7e-137 491.9 284 89.8
Nn1g10089 Nelumbo nucifera HOM05D003430 ORTHO05D004809 5.7e-137 491.9 284 89.8
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 1.8e-135 486.9 488 57.8
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 1.5e-134 483.8 284 88.4
Sopen00g002720 Solanum pennellii HOM05D003430 ORTHO05D004809 7.7e-134 481.5 284 88.0
Sc11g0004420 Simmondsia chinensis HOM05D003430 ORTHO05D004809 1.0e-133 481.1 284 88.0
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 8.5e-133 478.0 577 52.5
Peaxi162Scf00456g00035 Petunia axillaris HOM05D003430 ORTHO05D004809 2.1e-131 473.4 284 87.0
Psat3g040120 Pisum sativum HOM05D003430 ORTHO05D004809 6.7e-130 468.4 288 86.8
AUR62042332 Chenopodium quinoa HOM05D003430 ORTHO05D004809 2.6e-129 466.5 284 85.9
VMungo0044G0002 Vigna mungo HOM05D003430 ORTHO05D004809 6.3e-128 461.8 280 87.5
SalBow1G3892 Salvia bowleyana HOM05D003430 ORTHO05D004809 4.1e-127 459.1 284 85.6
Sopen11g022460 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-127 458.0 280 85.4
PGSC0003DMG400037371 Solanum tuberosum HOM05D003430 ORTHO05D004809 1.6e-126 457.2 276 86.6
CDE02G0363 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 7.2e-124 448.4 284 83.1
Hma1.2p1_1286F.1_g273040 Hydrangea macrophylla HOM05D003430 ORTHO05D004809 1.5e-121 440.7 284 82.7
arahy.Tifrunner.gnm1.ann1.41QMJ9 Arachis hypogaea HOM05D003430 ORTHO05D004809 4.8e-120 435.6 288 81.6
arahy.Tifrunner.gnm1.ann1.AJMC4E Arachis hypogaea HOM05D003430 ORTHO05D004809 4.8e-120 435.6 288 81.6
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 1.6e-118 430.6 262 82.1
unitig_87.g27925 Utricularia gibba HOM05D003430 ORTHO05D004809 2.0e-118 430.3 284 81.7
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 2.7e-118 429.9 261 82.4
Lalb_Chr00c39g0409071 Lupinus albus HOM05D003430 ORTHO05D004809 2.7e-118 429.9 271 84.9
Lalb_Chr00c39g0409251 Lupinus albus HOM05D003430 ORTHO05D004809 2.7e-118 429.9 271 84.9
Lalb_Chr00c51g0413171 Lupinus albus HOM05D003430 ORTHO05D004809 2.7e-118 429.9 271 84.9
arahy.Tifrunner.gnm1.ann1.ABQ8F7 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.5e-116 424.1 280 81.4
arahy.Tifrunner.gnm1.ann1.CY2VCK Arachis hypogaea HOM05D003430 ORTHO05D004809 1.5e-116 424.1 280 81.4
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 5.5e-116 422.2 285 75.1
Lalb_Chr10g0094601 Lupinus albus HOM05D003430 ORTHO05D004809 1.2e-115 421.0 271 83.4
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 2.2e-112 410.2 210 94.8
Lj2C1231G44 Lonicera japonica HOM05D003430 ORTHO05D004809 3.7e-112 409.5 279 79.2
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 1.9e-108 397.1 209 91.9
Zm00001eb435500 Zea mays HOM05D003430 ORTHO05D004809 2.5e-108 396.7 267 79.0
Zm00001eb436090 Zea mays HOM05D003430 ORTHO05D004809 2.5e-108 396.7 267 79.0
Zm00001eb437350 Zea mays HOM05D003430 ORTHO05D004809 2.5e-108 396.7 267 79.0
Zm00001eb440330 Zea mays HOM05D003430 ORTHO05D004809 2.5e-108 396.7 267 79.0
Zm00001eb440360 Zea mays HOM05D003430 ORTHO05D004809 2.5e-108 396.7 267 79.0
Zm00001eb442170 Zea mays HOM05D003430 ORTHO05D004809 2.5e-108 396.7 267 79.0
Lsat_1_v5_gn_6_109000 Lactuca sativa HOM05D003430 ORTHO05D004809 2.1e-107 393.7 274 77.0
SHI29634 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-106 390.2 284 75.0
Nn2g14911 Nelumbo nucifera HOM05D003430 ORTHO05D004809 2.2e-104 383.6 230 87.0
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 1.6e-102 377.5 200 91.5
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 4.5e-102 375.9 231 84.8
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 1.0e-101 374.8 243 77.8
Medtr0024s0140 Medicago truncatula HOM05D003430 ORTHO05D004809 2.5e-100 370.2 234 84.6
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 2.1e-99 367.1 209 84.7
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 4.7e-99 365.9 200 88.5
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 4.7e-99 365.9 200 88.5
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 4.7e-99 365.9 200 88.5
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 1.8e-98 364.0 210 86.7
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-96 357.8 200 86.0
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-96 357.8 200 86.0
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-96 357.8 200 86.0
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 4.6e-94 349.4 199 85.9
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 8.0e-91 338.6 200 84.5
arahy.Tifrunner.gnm1.ann1.087TPC Arachis hypogaea HOM05D003430 ORTHO05D004809 9.8e-89 331.6 288 67.7
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 2.2e-88 330.5 175 91.4
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 3.5e-86 323.2 206 78.6
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 3.5e-86 323.2 206 78.6
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 5.6e-84 315.8 180 85.0
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 3.6e-83 313.2 156 98.7
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 8.9e-82 308.5 211 74.4
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 2.7e-78 297.0 164 87.2
Lj2C1222G56 Lonicera japonica HOM05D003430 ORTHO05D004809 6.2e-75 285.8 179 85.5
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 1.1e-74 285.0 159 84.9
Nitab4.5_0000172g0240 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.1e-74 285.0 284 59.2
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 1.4e-74 284.6 156 85.9
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 8.9e-74 282.0 167 83.2
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.4e-71 274.6 181 75.1
RhsimMtG0004400 Rhododendron simsii HOM05D003430 ORTHO05D004809 2.5e-68 263.8 155 87.7
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 1.2e-67 261.5 151 83.4
EL10Ac3g07005 Beta vulgaris HOM05D003430 ORTHO05D004809 5.8e-65 252.7 154 86.4
SHI50824 Sapria himalayana HOM05D003430 ORTHO05D004809 2.4e-63 247.3 170 77.6
COL.COLO4_04428 Corchorus olitorius HOM05D003430 ORTHO05D004809 4.2e-63 246.5 148 84.5
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 9.3e-63 245.4 124 91.1
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 1.3e-59 235.0 140 84.3
HanXRQChr11g0335401 Helianthus annuus HOM05D003430 ORTHO05D004809 3.6e-59 233.4 223 61.9
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 1.2e-57 228.4 150 76.7
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 2.6e-57 227.3 146 74.7
arahy.Tifrunner.gnm1.ann1.0UJ9QK Arachis hypogaea HOM05D003430 ORTHO05D004809 2.2e-56 224.2 187 69.5
BolC1t03461H Brassica oleracea HOM05D003430 ORTHO05D004809 1.6e-54 218.0 153 75.8
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 1.6e-54 218.0 205 61.5
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 1.6e-54 218.0 205 61.5
Nitab4.5_0010559g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.6e-54 216.5 125 86.4
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 7.9e-54 215.7 111 91.9
Lsat_1_v5_gn_5_16620 Lactuca sativa HOM05D003430 ORTHO05D004809 5.6e-52 209.5 159 74.2
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 9.6e-52 208.8 109 85.3
Solyc11g039360.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.1e-47 195.3 119 81.5
CAN.G600.1 Capsicum annuum HOM05D003430 ORTHO05D004809 4.8e-43 179.9 115 78.3
Nitab4.5_0004256g0030 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.4e-42 178.3 116 79.3
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 9.0e-42 175.6 221 49.3
SHI20516 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-40 171.4 144 66.0
BolC1t03462H Brassica oleracea HOM05D003430 ORTHO05D004809 1.4e-39 168.3 93 90.3
Nitab4.5_0000172g0960 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.3e-36 157.1 160 60.0
arahy.Tifrunner.gnm1.ann1.J6HUIG Arachis hypogaea HOM05D003430 ORTHO05D026951 1.6e-35 154.8 89 87.6
Sabra12G0092700 Salix brachista HOM05D003430 ORTHO05D004809 2.2e-35 154.5 94 85.1
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 1.4e-34 151.8 92 83.7
Nitab4.5_0001152g0410 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.3e-32 145.2 93 82.8
Aqoxy4G00518 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 1.9e-31 141.4 83 88.0
SHI20518 Sapria himalayana HOM05D003430 ORTHO05D004809 1.9e-31 141.4 131 58.8
Lalb_Chr21g0308991 Lupinus albus HOM05D002109 ORTHO05D002149 2.1e-30 137.9 83 81.9
Gohir.D01G117000 Gossypium hirsutum HOM05D003430 ORTHO05D004809 8.8e-29 132.5 83 83.1
AT2G07815 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 6.3e-27 126.3 63 98.4
BraSC54t46375Z Brassica rapa HOM05D003430 ORTHO05D004809 6.3e-27 126.3 63 98.4
BraSC77t46627Z Brassica rapa HOM05D003430 ORTHO05D004809 6.3e-27 126.3 63 98.4
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 6.9e-26 122.9 234 35.9
HPP92_026915 Vanilla planifolia HOM05D003430 ORTHO05D004809 5.1e-21 106.7 68 73.5
Solyc05g025700.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.6e-20 104.4 109 52.3
SHI25674 Sapria himalayana HOM05D003430 ORTHO05D004809 5.9e-17 93.2 68 66.2
SHI04803 Sapria himalayana HOM05D003430 ORTHO05D004809 1.0e-16 92.4 80 61.2
SHI33657 Sapria himalayana HOM05D003430 ORTHO05D004809 1.0e-16 92.4 200 36.0
Medtr8g091515 Medicago truncatula HOM05D003430 ORTHO05D004809 3.8e-16 90.5 52 86.5
Nn044s41806 Nelumbo nucifera HOM05D003430 ORTHO05D004809 1.9e-15 88.2 46 93.5
TPR.G22979 Trifolium pratense HOM05D000681 ORTHO05D007906 2.5e-15 87.8 48 87.5
Solyc03g013370.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.2e-15 87.4 54 74.1
C01p34960 Brassica napus HOM05D003430 ORTHO05D004809 1.0e-13 82.4 167 37.1
SHI25675 Sapria himalayana HOM05D003430 ORTHO05D004809 1.4e-13 82.0 51 72.5
SHI32117 Sapria himalayana HOM05D003430 ORTHO05D004809 3.9e-13 80.5 67 64.2
SHI32119 Sapria himalayana HOM05D003430 ORTHO05D004809 3.9e-13 80.5 118 39.8
GSVIVG01031933001 Vitis vinifera HOM05D003430 ORTHO05D004809 3.9e-13 80.5 53 67.9
Prupe.5G026600 Prunus persica HOM05D003430 ORTHO05D004809 5.2e-13 80.1 68 60.3
SHI20517 Sapria himalayana HOM05D003430 ORTHO05D004809 6.7e-13 79.7 83 54.2
SHI33655 Sapria himalayana HOM05D003430 ORTHO05D004809 8.8e-13 79.3 160 38.1
Ciclev10017542m.g Citrus clementina HOM05D003430 ORTHO05D004809 1.5e-12 78.6 46 80.4
TPR.G24362 Trifolium pratense HOM05D003430 ORTHO05D004809 6.3e-11 73.2 61 72.1
Nitab4.5_0000172g1190 Nicotiana tabacum HOM05D003430 ORTHO05D004809 8.2e-11 72.8 40 87.5
SGA_v2.0_scaffold178G39492 Striga asiatica HOM05D003430 ORTHO05D004809 8.2e-11 72.8 53 64.2
Nitab4.5_0000684g0110 Nicotiana tabacum HOM05D003430 ORTHO05D015169 1.8e-10 71.6 47 72.3
Mapoly0017s0010 Marchantia polymorpha HOM05D003430 ORTHO05D004809 9.1e-10 69.3 59 62.7
SalBow1G2589 Salvia bowleyana HOM05D003430 ORTHO05D004809 1.6e-09 68.6 44 75.0
Medtr5g068830 Medicago truncatula HOM05D003430 ORTHO05D004809 5.9e-09 66.6 61 60.7
Peaxi162Scf00160g00035 Petunia axillaris HOM05D004637 ORTHO05D005320 2.9e-08 64.3 32 90.6
TPR.G457 Trifolium pratense HOM05D003430 ORTHO05D004809 4.2e-07 60.5 37 81.1
Solyc04g071020.1 Solanum lycopersicum HOM05D003430 ORTHO05D000314 1.2e-06 58.9 46 71.7


User provided reference genes

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