Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 3.4e-112 408.3 198 100.0
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 4.2e-78 295.0 171 87.7
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 4.2e-78 295.0 171 87.7
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 3.7e-66 255.4 210 66.7
SHI36144 Sapria himalayana HOM05D008793 ORTHO05D011782 3.9e-52 208.8 122 86.1
AT2G07776 Arabidopsis thaliana HOM05D008793 ORTHO05D014415 1.1e-46 190.7 108 91.7
ATMG00530 Arabidopsis thaliana HOM05D008793 ORTHO05D014415 1.1e-46 190.7 108 91.7
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 2.7e-45 186.0 99 88.9
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 1.4e-44 183.7 89 95.5
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 1.4e-44 183.7 89 95.5
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 1.4e-44 183.7 89 95.5
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 1.4e-44 183.7 89 95.5
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 3.9e-44 182.2 89 95.5
C01p35010 Brassica napus HOM05D008793 ORTHO05D014415 6.7e-44 181.4 118 81.4
CARHR282890 Cardamine hirsuta HOM05D008793 ORTHO05D014415 6.7e-44 181.4 104 90.4
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 1.5e-43 180.3 133 70.7
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 3.3e-43 179.1 90 94.4
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 2.8e-42 176.0 206 51.9
AL3G44400 Arabidopsis lyrata HOM05D008793 ORTHO05D014415 2.4e-41 172.9 108 84.3
GSVIVG01038015001 Vitis vinifera HOM05D008793 ORTHO05D014415 7.2e-38 161.4 95 85.3
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 9.4e-38 161.0 83 89.2
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 1.6e-37 160.2 101 75.2
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 2.7e-37 159.5 96 81.2
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 2.3e-36 156.4 79 92.4
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 5.7e-35 151.8 88 81.8
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 9.7e-35 151.0 77 90.9
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.6e-32 142.9 80 86.2
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-24 116.3 111 59.5
Nitab4.5_0000844g0180 Nicotiana tabacum HOM05D008793 ORTHO05D010994 5.9e-24 115.2 90 64.4
CDE02G0896 Ceratophyllum demersum HOM05D008793 ORTHO05D012151 1.9e-22 110.2 58 87.9
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 7.2e-22 108.2 62 87.1
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 9.4e-22 107.8 89 66.3
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.8e-20 103.6 59 84.7
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.8e-20 103.6 59 84.7
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 8.8e-20 101.3 58 81.0
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-19 100.9 58 86.2
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.2e-19 100.9 79 64.6
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-19 99.8 55 87.3
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.3e-18 97.4 107 52.3
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-18 97.1 78 67.9
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-18 96.7 55 81.8
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 2.8e-18 96.3 89 59.6
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 8.3e-18 94.7 57 80.7
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 2.4e-17 93.2 56 80.4
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-17 92.8 57 80.7
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 9.1e-17 91.3 59 74.6
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 9.1e-17 91.3 59 74.6
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 1.2e-16 90.9 113 46.9
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 1.2e-16 90.9 113 46.9
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 2.0e-16 90.1 56 78.6
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 2.0e-16 90.1 51 82.4
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-16 88.6 54 81.5
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-15 87.8 52 82.7
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.7e-15 87.0 49 83.7
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 1.7e-15 87.0 51 82.4
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 5.0e-15 85.5 52 80.8
BolSC28t60331H Brassica oleracea HOM05D008793 ORTHO05D014415 8.5e-15 84.7 51 82.4
BraSC48t46279Z Brassica rapa HOM05D008793 ORTHO05D014415 8.5e-15 84.7 51 82.4
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 1.1e-14 84.3 50 82.0
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 83.6 53 77.4
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-14 83.2 50 78.0
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.2e-14 82.8 96 51.0
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-14 81.6 52 82.7
BolSC28t60435H Brassica oleracea HOM05D008793 ORTHO05D012151 9.4e-14 81.3 45 91.1
BraSC77t46659Z Brassica rapa HOM05D008793 ORTHO05D012151 9.4e-14 81.3 45 91.1
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-13 80.9 52 76.9
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-13 80.9 47 83.0
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-13 80.9 47 78.7
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-13 80.9 46 84.8
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-13 80.5 55 76.4
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-13 80.1 50 80.0
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 4.7e-13 79.0 46 82.6
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 4.7e-13 79.0 46 82.6
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 8.0e-13 78.2 50 78.0
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-12 77.4 48 79.2
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-12 77.4 46 82.6
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-12 77.0 95 49.5
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 2.3e-12 76.6 46 73.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.3e-12 76.6 40 85.0
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-12 76.6 43 83.7
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-12 76.3 43 83.7
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-12 76.3 46 80.4
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 4.0e-12 75.9 50 74.0
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 4.0e-12 75.9 63 65.1
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 5.2e-12 75.5 46 78.3
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 8.8e-12 74.7 36 88.9
Lsat_1_v5_gn_6_108880 Lactuca sativa HOM05D008793 ORTHO05D014415 4.4e-11 72.4 47 80.9
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-10 70.5 50 74.0
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 1.7e-10 70.5 43 76.7
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-10 69.7 42 81.0
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-09 67.8 51 66.7
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 1.4e-09 67.4 43 74.4
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-09 65.5 38 84.2
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-08 62.4 38 78.9
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-08 62.0 39 79.5
Nitab4.5_0000172g0590 Nicotiana tabacum HOM05D008793 ORTHO05D012151 1.3e-07 60.8 36 77.8
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-07 60.8 37 81.1
PGSC0003DMG400044646 Solanum tuberosum HOM05D008793 ORTHO05D000034 5.0e-07 58.9 30 86.7
SHI31533 Sapria himalayana HOM05D000743 ORTHO05D000580 8.6e-07 58.2 42 69.0
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 2.5e-06 56.6 37 78.4
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 3.3e-06 56.2 37 78.4
RhsimMtG0005600 Rhododendron simsii HOM05D009805 ORTHO05D010994 9.5e-06 54.7 39 82.1


User provided reference genes

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