Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 6.9e-171 604.0 325 100.0
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 6.7e-150 534.3 329 83.9
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.5e-149 533.1 328 86.3
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 4.3e-149 531.6 322 83.9
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.3e-148 530.0 326 83.7
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 2.4e-147 525.8 328 82.0
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 6.9e-147 524.2 326 83.1
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 6.9e-147 524.2 328 81.7
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 6.9e-147 524.2 322 82.3
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.2e-146 523.5 328 81.7
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.2e-146 523.5 328 81.7
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 5.0e-145 518.1 331 83.7
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 7.7e-130 467.6 326 74.8
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 5.0e-121 438.3 324 69.4
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 4.2e-112 408.7 333 64.0
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 9.4e-112 407.5 332 63.9
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 2.7e-111 406.0 333 65.2
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 6.1e-111 404.8 337 64.4
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.0e-110 404.1 331 65.0
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.8e-110 403.3 274 73.7
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 6.8e-110 401.4 329 62.9
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.5e-109 400.2 331 63.4
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.5e-109 400.2 331 63.4
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.6e-109 399.4 267 73.8
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 3.4e-109 399.1 333 64.0
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 3.4e-109 399.1 329 62.9
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 7.5e-109 397.9 331 63.1
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 9.8e-109 397.5 335 65.1
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 2.8e-108 396.0 333 62.2
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 2.8e-108 396.0 327 63.0
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 3.7e-108 395.6 337 62.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 3.7e-108 395.6 267 73.4
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.9e-108 395.2 333 62.2
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 8.3e-108 394.4 335 63.0
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.4e-107 393.7 269 72.1
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 1.4e-107 393.7 269 72.1
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.4e-107 393.7 267 72.3
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.4e-107 393.7 331 61.0
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.4e-107 392.9 333 62.2
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 3.1e-107 392.5 327 63.9
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 3.1e-107 392.5 335 60.0
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.4e-107 391.7 332 61.7
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 5.4e-107 391.7 333 62.5
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 7.0e-107 391.3 276 70.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.7e-106 387.9 275 70.9
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.0e-105 387.5 274 70.4
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.3e-105 387.1 340 61.5
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.3e-105 387.1 277 71.1
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.7e-105 386.7 252 73.8
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.7e-105 386.7 269 72.1
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.3e-105 386.3 267 71.5
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 2.3e-105 386.3 262 71.8
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 2.9e-105 386.0 270 70.4
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 3.8e-105 385.6 332 61.1
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.8e-105 385.6 268 71.3
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 5.0e-105 385.2 329 60.2
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 5.0e-105 385.2 337 60.5
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 6.6e-105 384.8 260 71.5
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 8.6e-105 384.4 274 70.1
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.9e-104 383.3 260 71.2
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 3.3e-104 382.5 271 70.5
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 3.3e-104 382.5 318 61.9
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 7.3e-104 381.3 270 69.6
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 7.3e-104 381.3 270 69.3
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.3e-104 381.3 275 70.2
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 7.3e-104 381.3 337 61.4
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 7.3e-104 381.3 249 74.3
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.2e-103 380.6 274 70.1
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 2.1e-103 379.8 327 61.8
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.1e-103 379.8 337 61.1
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.6e-103 379.0 274 69.7
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 1.0e-102 377.5 273 68.1
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.3e-102 376.3 249 72.7
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 2.3e-102 376.3 327 60.6
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 2.3e-102 376.3 329 61.7
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.3e-102 376.3 267 68.9
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.0e-102 375.9 315 62.2
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 5.2e-102 375.2 325 60.3
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 8.9e-102 374.4 270 68.5
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 8.9e-102 374.4 327 60.9
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 8.9e-102 374.4 327 61.5
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.2e-101 374.0 249 72.7
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.2e-101 374.0 337 59.9
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.5e-101 373.6 251 71.7
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 4.4e-101 372.1 326 60.4
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 1.7e-100 370.2 252 70.2
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.2e-100 369.8 320 60.6
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.4e-99 367.1 306 63.1
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.4e-99 367.1 270 67.8
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 1.8e-99 366.7 254 70.5
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.8e-99 366.7 276 66.7
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 5.4e-99 365.2 258 69.4
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 7.0e-99 364.8 275 66.9
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.2e-98 364.0 275 66.2
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.7e-98 362.8 272 68.0
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 2.7e-98 362.8 270 65.9
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.3e-97 359.8 249 70.3
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 6.6e-97 358.2 257 69.6
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.5e-96 357.1 322 58.4
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.6e-95 353.6 248 69.8
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 3.6e-95 352.4 404 50.5
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.3e-92 344.0 261 67.8
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.7e-92 343.6 271 65.3
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 9.5e-88 327.8 304 59.5
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 2.8e-87 326.2 295 63.1
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 7.5e-85 318.2 272 60.7
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 7.5e-85 318.2 266 59.8
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 3.2e-83 312.8 275 59.3
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.2e-82 310.8 345 52.8
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 3.0e-73 279.6 274 54.4
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 2.1e-71 273.5 274 56.2
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 6.9e-70 268.5 232 59.9
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 5.8e-69 265.4 335 48.1
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 5.4e-59 232.3 238 50.0
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.0e-57 228.0 262 44.7
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 2.6e-53 213.4 234 48.3
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 3.4e-53 213.0 217 54.4
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.1e-50 203.8 148 70.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.3e-49 201.1 147 70.7
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.1e-48 198.0 207 54.6
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 5.6e-48 195.7 269 40.1
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 7.4e-48 195.3 148 62.2
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 4.8e-47 192.6 225 55.6
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 6.2e-47 192.2 247 40.9
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.0e-46 188.3 124 72.6
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.0e-46 188.3 124 72.6
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.8e-45 185.7 109 82.6
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 1.7e-44 184.1 124 73.4
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 3.5e-42 176.4 170 55.3
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 8.2e-39 165.2 234 37.2
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 1.9e-35 154.1 248 37.5
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 9.7e-32 141.7 78 88.5
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 9.7e-32 141.7 78 88.5
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 9.7e-32 141.7 78 88.5
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 3.4e-29 133.3 90 70.0
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.9e-28 130.2 100 63.0
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 7.9e-26 122.1 81 75.3
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.1e-24 118.2 89 68.5
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.3e-24 116.7 88 67.0
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-22 111.3 66 81.8
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.3e-22 109.4 105 58.1
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.5e-21 107.8 65 80.0
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.5e-21 107.8 174 41.4
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.0e-21 107.5 213 31.0
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 3.0e-17 93.6 118 47.5
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 5.2e-17 92.8 52 88.5
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.3e-15 88.2 60 75.0
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 3.1e-14 83.6 64 67.2
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 7.0e-14 82.4 47 87.2
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 1.2e-13 81.6 154 34.4
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 6.1e-10 69.3 51 64.7
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.3e-08 63.5 45 73.3


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