Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 4.0e-198 694.5 339 100.0
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 7.4e-168 594.0 339 84.1
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 2.9e-164 582.0 343 81.9
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 2.9e-164 582.0 343 81.9
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 1.4e-163 579.7 339 83.2
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 3.0e-161 572.0 339 80.2
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 5.2e-161 571.2 333 81.7
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 3.3e-160 568.5 333 81.1
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 3.3e-160 568.5 333 81.1
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 5.7e-160 567.8 323 82.7
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 9.7e-160 567.0 319 82.1
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 4.8e-159 564.7 334 79.9
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.1e-158 563.5 319 82.4
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 1.4e-158 563.1 333 80.5
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 1.4e-158 563.1 333 80.5
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 4.1e-158 561.6 319 82.1
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 5.3e-158 561.2 328 80.8
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 9.1e-158 560.5 319 82.1
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 9.1e-158 560.5 319 82.1
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 1.2e-157 560.1 321 81.6
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.6e-157 558.9 319 82.1
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 4.5e-157 558.1 321 80.4
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.9e-155 552.7 322 80.1
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.2e-155 552.0 329 80.9
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 3.2e-155 552.0 329 79.6
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.2e-155 551.6 329 81.2
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 7.2e-155 550.8 326 81.3
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 9.4e-155 550.4 320 82.2
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.1e-154 549.3 318 80.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 2.1e-154 549.3 327 79.5
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 2.7e-154 548.9 326 79.4
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 4.7e-154 548.1 327 78.9
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 8.0e-154 547.4 316 81.3
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 1.8e-153 546.2 320 80.6
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 3.0e-153 545.4 323 80.2
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 4.0e-153 545.0 321 80.7
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 5.2e-153 544.7 324 79.6
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 8.8e-153 543.9 328 79.0
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.2e-152 543.5 324 79.6
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.2e-152 543.5 317 80.8
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.2e-152 543.5 328 78.7
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.5e-152 543.1 320 80.6
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 1.5e-152 543.1 328 78.7
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.3e-152 542.0 327 77.1
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 5.7e-152 541.2 321 78.2
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 5.7e-152 541.2 321 79.1
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 5.7e-152 541.2 315 79.4
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 7.5e-152 540.8 333 77.2
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 7.5e-152 540.8 317 80.4
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 9.7e-152 540.4 324 78.1
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 9.7e-152 540.4 324 78.1
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 9.7e-152 540.4 324 78.1
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 1.3e-151 540.0 327 79.2
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.3e-151 540.0 321 78.8
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.7e-151 539.7 326 77.9
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 2.8e-151 538.9 313 80.2
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.8e-151 538.9 316 80.1
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.8e-151 538.9 323 78.6
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 2.8e-151 538.9 318 78.0
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 3.7e-151 538.5 313 80.5
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 3.7e-151 538.5 320 78.1
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 4.8e-151 538.1 320 78.4
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 6.3e-151 537.7 314 81.2
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 8.2e-151 537.3 316 78.8
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 8.2e-151 537.3 331 78.2
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.1e-150 537.0 323 78.0
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 1.1e-150 537.0 313 79.6
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.1e-150 537.0 321 79.4
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.4e-150 536.6 324 79.3
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.4e-150 536.6 321 79.1
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.8e-150 536.2 324 79.3
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.8e-150 536.2 322 77.3
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 3.1e-150 535.4 325 77.8
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 4.1e-150 535.0 313 79.2
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 5.3e-150 534.6 321 78.8
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 9.1e-150 533.9 319 78.7
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 9.1e-150 533.9 320 78.1
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 9.1e-150 533.9 321 78.8
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 2.0e-149 532.7 323 77.7
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 2.7e-149 532.3 320 78.4
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 4.5e-149 531.6 323 77.4
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 4.5e-149 531.6 317 78.9
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 4.5e-149 531.6 321 78.5
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 7.7e-149 530.8 316 79.1
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 1.0e-148 530.4 325 75.4
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.3e-148 530.0 313 79.9
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.2e-148 529.3 329 77.2
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 2.2e-148 529.3 314 78.0
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 3.8e-148 528.5 329 76.6
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 3.8e-148 528.5 322 77.6
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 5.0e-148 528.1 310 79.0
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 8.5e-148 527.3 329 76.9
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.1e-147 526.9 320 78.1
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.5e-147 526.6 314 79.0
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 2.5e-147 525.8 316 77.5
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 4.2e-147 525.0 326 77.3
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.1e-146 522.7 378 69.3
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 2.3e-145 519.2 313 76.4
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 8.8e-145 517.3 319 73.7
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.0e-144 516.2 317 76.3
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 2.6e-144 515.8 311 76.8
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 4.4e-144 515.0 306 79.7
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 5.4e-142 508.1 349 69.9
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 2.3e-140 502.7 323 74.0
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.5e-139 500.0 298 78.9
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.2e-136 490.3 315 72.1
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 2.2e-135 486.1 311 71.4
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.6e-133 479.9 278 79.9
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 2.9e-132 475.7 302 71.9
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 3.3e-131 472.2 310 69.0
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 1.6e-130 469.9 320 69.1
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.0e-128 463.0 308 72.1
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 4.9e-127 458.4 279 77.4
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 5.4e-126 454.9 305 67.5
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 1.6e-125 453.4 308 65.3
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 2.0e-125 453.0 267 78.7
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.4e-121 440.3 308 63.3
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.4e-121 440.3 308 63.3
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 8.9e-121 437.6 338 64.5
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 1.2e-114 417.2 251 76.1
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.9e-111 406.0 307 60.3
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 9.9e-104 380.9 318 58.5
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 7.8e-101 371.3 228 77.2
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 3.3e-91 339.3 250 65.6
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.8e-89 333.6 215 72.1
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 3.4e-88 329.3 315 50.8
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 5.3e-81 305.4 344 44.8
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 6.5e-71 271.9 380 40.3
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.8e-49 200.7 123 72.4
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 8.8e-28 128.6 89 73.0
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 3.4e-27 126.7 82 75.6
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.0e-20 103.2 80 67.5
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 7.0e-17 92.4 68 67.6
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 1.0e-12 78.6 44 79.5
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 4.0e-12 76.6 50 70.0
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 4.0e-12 76.6 41 82.9
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 7.5e-11 72.4 68 55.9
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 5.6e-06 56.2 47 53.2


User provided reference genes

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