Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G9530 Aethionema arabicum HOM05D006751 ORTHO05D008710 1.6e-129 466.1 234 100.0
Aa31LG9G5060 Aethionema arabicum HOM05D006751 ORTHO05D008710 2.7e-52 209.5 124 83.1
Aa31LG7G15740 Aethionema arabicum HOM05D002105 ORTHO05D001271 4.2e-37 159.1 182 54.4
THA.LOC104821658 Tarenaya hassleriana HOM05D006751 ORTHO05D008710 6.3e-33 145.2 124 59.7
Sp7g10140 Schrenkiella parvula HOM05D006751 ORTHO05D008710 1.2e-31 141.0 123 63.4
AL9U11370 Arabidopsis lyrata HOM05D006751 ORTHO05D008710 2.2e-30 136.7 123 61.8
CARHR218330 Cardamine hirsuta HOM05D006751 ORTHO05D008710 1.2e-28 131.0 115 63.5
AT4G13030 Arabidopsis thaliana HOM05D006751 ORTHO05D008710 1.6e-28 130.6 123 59.3
A08p07190 Brassica napus HOM05D006751 ORTHO05D008710 1.5e-26 124.0 114 59.6
BraA08t32731Z Brassica rapa HOM05D006751 ORTHO05D008710 1.5e-26 124.0 114 59.6
BcaC07g37406 Brassica carinata HOM05D006751 ORTHO05D008710 2.6e-26 123.2 114 58.8
C08p08830 Brassica napus HOM05D006751 ORTHO05D008710 2.6e-26 123.2 114 58.8
BolC8t47729H Brassica oleracea HOM05D006751 ORTHO05D008710 2.6e-26 123.2 114 58.8
BcaB04g17726 Brassica carinata HOM05D006751 ORTHO05D008710 4.4e-26 122.5 123 56.9
FvH4_2g18360 Fragaria vesca HOM05D006751 ORTHO05D008710 1.8e-24 117.1 110 52.7
FAN24G0495 Fragaria x ananassa HOM05D006751 ORTHO05D008710 1.8e-24 117.1 110 52.7
FAN27G0238 Fragaria x ananassa HOM05D006751 ORTHO05D009307 1.8e-24 117.1 112 51.8
AUR62016527 Chenopodium quinoa HOM05D006751 ORTHO05D008710 3.1e-24 116.3 123 48.0
AUR62001149 Chenopodium quinoa HOM05D006751 ORTHO05D008710 7.0e-24 115.2 123 48.0
FAN27G0294 Fragaria x ananassa HOM05D006751 ORTHO05D008710 9.1e-24 114.8 110 51.8
RcHm_v2.0_Chr6g0283741 Rosa chinensis HOM05D006751 ORTHO05D008710 1.2e-23 114.4 110 51.8
Thecc.01G216600 Theobroma cacao HOM05D006751 ORTHO05D008710 2.0e-23 113.6 123 49.6
Duzib133G0478 Durio zibethinus HOM05D006751 ORTHO05D008710 2.7e-23 113.2 113 51.3
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 2.7e-23 113.2 126 46.0
Atru.chr6.1446 Acer truncatum HOM05D006751 ORTHO05D008710 4.5e-23 112.5 124 50.0
Haze_03352 Corylus avellana HOM05D006751 ORTHO05D008710 5.9e-23 112.1 175 39.4
TWI18G0571 Tripterygium wilfordii HOM05D006751 ORTHO05D008710 5.9e-23 112.1 123 45.5
Eucgr.H00756 Eucalyptus grandis HOM05D006751 ORTHO05D008710 1.3e-22 110.9 123 46.3
Atru.chr6.1445 Acer truncatum HOM05D006751 ORTHO05D008710 1.7e-22 110.5 124 48.4
CSS0035402 Camellia sinensis var. sinensis HOM05D006751 ORTHO05D008710 1.7e-22 110.5 123 48.0
Cpa.g.sc8.122 Carica papaya HOM05D006751 ORTHO05D008710 1.7e-22 110.5 190 39.5
Oeu003263.2 Olea europaea HOM05D006751 ORTHO05D008710 1.7e-22 110.5 123 48.0
Glyma.18G158800 Glycine max HOM05D006751 ORTHO05D008710 3.8e-22 109.4 123 48.8
Prupe.8G196400 Prunus persica HOM05D006751 ORTHO05D008710 3.8e-22 109.4 114 48.2
Sc17g0001950 Simmondsia chinensis HOM05D006751 ORTHO05D009307 3.8e-22 109.4 123 45.5
Cfa010403 Carpinus fangiana HOM05D006751 ORTHO05D008710 5.0e-22 109.0 123 48.0
Dinv28842 Davidia involucrata HOM05D006751 ORTHO05D008710 5.0e-22 109.0 123 46.3
Ciclev10020463m.g Citrus clementina HOM05D006751 ORTHO05D008710 8.5e-22 108.2 114 47.4
Phvul.008G132700 Phaseolus vulgaris HOM05D006751 ORTHO05D008710 8.5e-22 108.2 114 48.2
VMungo1383G3158 Vigna mungo HOM05D006751 ORTHO05D008710 8.5e-22 108.2 126 46.8
QL09p049892 Quercus lobata HOM05D006751 ORTHO05D008710 1.1e-21 107.8 124 45.2
Nn1g08194 Nelumbo nucifera HOM05D006751 ORTHO05D008710 1.5e-21 107.5 138 42.0
EL10Ac7g17934 Beta vulgaris HOM05D006751 ORTHO05D008710 1.9e-21 107.1 123 43.1
PSO017G4001 Papaver somniferum HOM05D006751 ORTHO05D008710 1.9e-21 107.1 114 49.1
vmacro14722 Vaccinium macrocarpon HOM05D006751 ORTHO05D008710 1.9e-21 107.1 123 43.9
CiPaw.13G050300 Carya illinoinensis HOM05D006751 ORTHO05D008710 2.5e-21 106.7 123 48.0
EL10Ac5g11653 Beta vulgaris HOM05D006751 ORTHO05D008710 3.2e-21 106.3 125 42.4
MD10G1157500 Malus domestica HOM05D006751 ORTHO05D008710 3.2e-21 106.3 114 48.2
arahy.Tifrunner.gnm1.ann1.5UHD3M Arachis hypogaea HOM05D006751 ORTHO05D008710 4.2e-21 105.9 123 47.2
COL.COLO4_16111 Corchorus olitorius HOM05D006751 ORTHO05D008710 5.5e-21 105.5 111 50.5
Lalb_Chr03g0041361 Lupinus albus HOM05D006751 ORTHO05D008710 9.4e-21 104.8 124 44.4
Potri.002G247400 Populus trichocarpa HOM05D006751 ORTHO05D008710 9.4e-21 104.8 123 45.5
MSTRG.18827 Avicennia marina HOM05D006751 ORTHO05D008710 1.2e-20 104.4 125 47.2
Manes.12G049300 Manihot esculenta HOM05D006751 ORTHO05D008710 1.2e-20 104.4 123 47.2
Oeu041603.1 Olea europaea HOM05D006751 ORTHO05D008710 1.2e-20 104.4 123 44.7
Hund18452 Selenicereus undatus HOM05D006751 ORTHO05D008710 1.6e-20 104.0 180 36.1
Gohir.A11G140300 Gossypium hirsutum HOM05D006751 ORTHO05D008710 2.1e-20 103.6 116 47.4
MD05G1169200 Malus domestica HOM05D006751 ORTHO05D008710 2.1e-20 103.6 114 47.4
Hund05587 Selenicereus undatus HOM05D006751 ORTHO05D008710 2.1e-20 103.6 114 47.4
Rhsim01G0251000 Rhododendron simsii HOM05D006751 ORTHO05D008710 2.7e-20 103.2 123 43.9
Thecc.01G216700 Theobroma cacao HOM05D006751 ORTHO05D008710 2.7e-20 103.2 123 45.5
Ca_07507_v3 Cicer arietinum L. HOM05D006751 ORTHO05D008710 3.6e-20 102.8 123 46.3
DCAR_012676 Daucus carota HOM05D006751 ORTHO05D008710 4.7e-20 102.4 123 45.5
Actinidia09459 Actinidia chinensis HOM05D006751 ORTHO05D008710 8.0e-20 101.7 161 39.8
TPR.G28325 Trifolium pratense HOM05D006751 ORTHO05D008710 1.0e-19 101.3 124 46.0
Gorai.007G157000 Gossypium raimondii HOM05D006751 ORTHO05D008710 1.8e-19 100.5 114 47.4
MELO3C021072.2 Cucumis melo HOM05D006751 ORTHO05D008710 2.3e-19 100.1 121 43.8
Hma1.2p1_0149F.1_g066540 Hydrangea macrophylla HOM05D006751 ORTHO05D008710 2.3e-19 100.1 123 43.1
ClCG09G008710 Citrullus lanatus HOM05D006751 ORTHO05D008710 3.0e-19 99.8 114 47.4
CsaV3_7G026250 Cucumis sativus L. HOM05D006751 ORTHO05D008710 4.0e-19 99.4 114 46.5
Migut.O00924 Erythranthe guttata HOM05D006751 ORTHO05D008710 5.2e-19 99.0 123 47.2
Lj1g0007193 Lotus japonicus HOM05D006751 ORTHO05D008710 5.2e-19 99.0 123 43.9
Cc01_g16530 Coffea canephora HOM05D006751 ORTHO05D008710 1.5e-18 97.4 124 41.9
PSO063G4788 Papaver somniferum HOM05D006751 ORTHO05D008710 1.5e-18 97.4 114 46.5
Migut.D02514 Erythranthe guttata HOM05D006751 ORTHO05D008710 2.0e-18 97.1 123 42.3
Medtr7g055720 Medicago truncatula HOM05D006751 ORTHO05D008710 2.0e-18 97.1 124 44.4
Sed0014566 Sechium edule HOM05D006751 ORTHO05D008710 2.6e-18 96.7 123 43.1
Medtr7g055730 Medicago truncatula HOM05D006751 ORTHO05D008710 3.4e-18 96.3 126 42.9
PGR083G0288 Punica granatum HOM05D006751 ORTHO05D008710 3.4e-18 96.3 114 43.9
TAR636G1901 Trochodendron aralioides HOM05D006751 ORTHO05D008710 5.7e-18 95.5 176 35.2
Gohir.D11G146600 Gossypium hirsutum HOM05D006751 ORTHO05D008710 9.8e-18 94.7 89 53.9
FAN15G3221 Fragaria x ananassa HOM05D006751 ORTHO05D008710 1.3e-17 94.4 86 55.8
TPR.G29151 Trifolium pratense HOM05D006751 ORTHO05D008710 1.3e-17 94.4 124 42.7
Peaxi162Scf01312g00068 Petunia axillaris HOM05D006751 ORTHO05D008710 3.7e-17 92.8 107 43.9
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.8e-17 92.4 131 41.2
FvH4_2g18361 Fragaria vesca HOM05D006751 ORTHO05D008710 6.3e-17 92.0 86 55.8
arahy.Tifrunner.gnm1.ann1.HN87AT Arachis hypogaea HOM05D006751 ORTHO05D008710 1.4e-16 90.9 148 38.5
Nitab4.5_0003020g0170 Nicotiana tabacum HOM05D006751 ORTHO05D008710 1.8e-16 90.5 131 40.5
HPP92_016887 Vanilla planifolia HOM05D006751 ORTHO05D008710 2.4e-16 90.1 89 52.8
Lsat_1_v5_gn_9_17301 Lactuca sativa HOM05D006751 ORTHO05D008710 5.4e-16 89.0 86 50.0
Solyc06g083220.3 Solanum lycopersicum HOM05D006751 ORTHO05D008710 5.4e-16 89.0 87 49.4
Sopen06g034610 Solanum pennellii HOM05D006751 ORTHO05D008710 7.0e-16 88.6 87 49.4
PGSC0003DMG400020172 Solanum tuberosum HOM05D006751 ORTHO05D008710 7.0e-16 88.6 87 49.4
Os05g0274300 Oryza sativa ssp. japonica HOM05D006751 ORTHO05D008710 9.1e-16 88.2 125 44.0
Aa31LG10G2020 Aethionema arabicum HOM05D002105 ORTHO05D001271 1.6e-15 87.4 58 75.9
unitig_37.g12882 Utricularia gibba HOM05D006751 ORTHO05D008710 1.6e-15 87.4 125 42.4
GSVIVG01004748001 Vitis vinifera HOM05D006751 ORTHO05D008710 1.6e-15 87.4 124 41.1
Peaxi162Scf01312g00069 Petunia axillaris HOM05D006751 ORTHO05D008710 2.7e-15 86.7 101 42.6
Aqoxy2G03936 Aquilegia oxysepala HOM05D006751 ORTHO05D008710 7.7e-15 85.1 94 51.1
MBI16_g06251_MAGBIO Magnolia biondii HOM05D006751 ORTHO05D008710 1.7e-14 84.0 84 53.6
SEGI_02078 Sequoiadendron giganteum HOM05D006751 ORTHO05D008710 2.9e-14 83.2 87 46.0
HanXRQChr07g0193061 Helianthus annuus HOM05D006751 ORTHO05D008710 6.5e-14 82.0 86 46.5
Aa31LG8G11430 Aethionema arabicum HOM05D002105 ORTHO05D001271 8.6e-14 81.6 51 80.4
Actinidia23767 Actinidia chinensis HOM05D006751 ORTHO05D008710 2.5e-13 80.1 105 39.0
TAR636G0851 Trochodendron aralioides HOM05D006751 ORTHO05D008710 4.2e-13 79.3 71 53.5
Pp3c21_18970 Physcomitrium patens HOM05D006751 ORTHO05D008710 7.2e-13 78.6 118 39.0
HanXRQChr10g0316091 Helianthus annuus HOM05D006751 ORTHO05D008710 2.8e-12 76.6 85 45.9
Sabra02G0188300 Salix brachista HOM05D006751 ORTHO05D008710 8.0e-12 75.1 136 34.6
Zm00001eb261870 Zea mays HOM05D006751 ORTHO05D008710 1.5e-10 70.9 88 45.5
Zm00001eb318450 Zea mays HOM05D006751 ORTHO05D008710 7.5e-10 68.6 112 41.1
MELO3C030756.2 Cucumis melo HOM05D006751 ORTHO05D008710 1.0e-06 58.2 121 33.9
GSVIVG01028077001 Vitis vinifera HOM05D007689 ORTHO05D009701 2.3e-06 57.0 86 33.7
Mapoly0051s0107 Marchantia polymorpha HOM05D006751 ORTHO05D008710 2.9e-06 56.6 116 28.4
Eucgr.H04024 Eucalyptus grandis HOM05D007689 ORTHO05D009701 6.6e-06 55.5 103 33.0


User provided reference genes

Program Settings