Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 2.3e-184 648.7 313 100.0
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 3.3e-146 521.9 315 79.4
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 8.4e-142 507.3 315 76.5
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 2.7e-140 502.3 305 78.7
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 3.5e-140 501.9 309 76.7
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 9.0e-136 487.3 315 74.9
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 6.9e-128 461.1 314 71.0
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 9.1e-128 460.7 313 71.9
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 1.8e-123 446.4 308 69.5
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 5.1e-123 444.9 306 69.9
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 6.7e-123 444.5 306 69.6
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 7.4e-122 441.0 314 66.9
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 9.7e-122 440.7 308 69.2
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 1.4e-120 436.8 315 67.3
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 3.1e-120 435.6 314 66.6
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 3.1e-120 435.6 314 66.6
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 4.1e-120 435.3 314 66.6
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 7.0e-120 434.5 314 66.2
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 9.1e-120 434.1 317 66.6
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 1.2e-119 433.7 317 66.9
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 2.6e-119 432.6 313 66.8
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 3.4e-119 432.2 307 68.7
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 3.4e-119 432.2 314 65.3
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 7.7e-119 431.0 314 67.8
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 7.7e-119 431.0 314 66.2
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.3e-118 430.3 317 66.2
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 1.3e-118 430.3 317 64.7
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 1.3e-118 430.3 306 67.6
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 1.7e-118 429.9 313 64.9
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 2.2e-118 429.5 317 65.3
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 1.1e-117 427.2 314 65.3
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 1.1e-117 427.2 316 64.2
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 3.2e-117 425.6 315 64.1
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 3.2e-117 425.6 316 66.1
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 5.5e-117 424.9 314 65.0
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 7.2e-117 424.5 313 64.2
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 7.2e-117 424.5 316 66.8
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 1.2e-116 423.7 315 66.3
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 2.1e-116 422.9 314 65.3
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 2.7e-116 422.5 312 65.7
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 3.6e-116 422.2 315 65.1
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 6.1e-116 421.4 313 66.1
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 8.0e-116 421.0 310 66.8
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.0e-115 420.6 313 65.2
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 1.4e-115 420.2 314 65.6
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 2.3e-115 419.5 313 64.9
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 3.0e-115 419.1 317 63.7
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 8.8e-115 417.5 316 63.0
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 1.1e-114 417.2 314 66.6
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 1.1e-114 417.2 315 62.2
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 5.7e-114 414.8 315 64.1
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 5.7e-114 414.8 315 63.8
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 1.3e-113 413.7 313 62.9
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 1.3e-113 413.7 314 61.8
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 1.7e-113 413.3 314 62.4
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 2.2e-113 412.9 315 65.1
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 2.8e-113 412.5 315 63.8
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 3.7e-113 412.1 313 65.2
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 6.3e-113 411.4 317 64.0
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 8.2e-113 411.0 303 66.3
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 1.8e-112 409.8 311 64.0
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 3.1e-112 409.1 315 62.2
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 7.0e-112 407.9 319 62.4
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 9.1e-112 407.5 313 62.9
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.6e-111 406.8 315 61.9
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 4.5e-111 405.2 311 64.0
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 4.5e-111 405.2 316 59.8
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 5.9e-111 404.8 303 64.0
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 1.0e-110 404.1 316 59.8
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 1.3e-110 403.7 315 61.6
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 1.3e-110 403.7 315 61.6
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.3e-110 403.7 305 63.3
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 2.2e-110 402.9 315 62.2
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 2.9e-110 402.5 303 63.4
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 5.0e-110 401.7 315 61.9
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 6.5e-110 401.4 317 62.1
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 8.5e-110 401.0 315 62.2
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 8.5e-110 401.0 317 61.8
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 1.1e-109 400.6 315 61.9
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 1.5e-109 400.2 313 62.9
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 1.5e-109 400.2 303 62.7
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 2.5e-109 399.4 304 63.2
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 3.2e-109 399.1 313 62.6
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 3.2e-109 399.1 317 61.5
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 7.2e-109 397.9 303 62.7
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.6e-108 396.7 315 62.5
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 2.1e-108 396.4 303 61.4
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 2.1e-108 396.4 315 61.0
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 3.6e-108 395.6 315 61.3
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.4e-107 393.7 317 63.1
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 4.0e-107 392.1 303 60.4
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 5.2e-107 391.7 316 60.1
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 8.8e-107 391.0 312 61.2
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 1.5e-106 390.2 315 61.0
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 4.4e-106 388.7 311 60.1
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 5.7e-106 388.3 314 60.2
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 5.7e-106 388.3 313 61.0
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 1.3e-105 387.1 304 60.5
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 8.2e-105 384.4 308 60.4
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.4e-104 382.9 314 58.9
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 9.1e-104 380.9 276 68.8
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 1.7e-102 376.7 316 58.9
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 1.7e-102 376.7 306 61.8
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 3.8e-102 375.6 311 60.5
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.5e-101 373.6 315 59.4
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 3.6e-100 369.0 314 57.3
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 4.0e-99 365.5 318 58.2
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.2e-98 364.0 322 57.8
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 5.7e-98 361.7 313 59.1
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 1.3e-97 360.5 308 57.1
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 4.8e-97 358.6 311 58.5
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 1.8e-96 356.7 314 54.1
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 1.2e-95 354.0 306 56.5
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 1.2e-90 337.4 250 63.2
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 5.7e-90 335.1 269 62.1
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 2.8e-89 332.8 261 63.2
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.0e-87 326.6 260 61.5
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 5.9e-87 325.1 353 47.3
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 1.6e-84 317.0 298 53.0
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.4e-80 303.9 313 51.8
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 1.1e-77 294.3 212 69.8
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 1.4e-75 287.3 313 50.5
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 6.0e-71 271.9 312 47.1
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 3.0e-70 269.6 320 46.6
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 5.1e-70 268.9 186 69.4
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 2.8e-68 263.1 337 44.8
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 6.2e-68 261.9 327 47.7
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 1.4e-67 260.8 362 43.1
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 4.7e-60 235.7 253 50.6
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 5.8e-58 228.8 192 56.8
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 3.2e-56 223.0 344 40.4
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 1.1e-53 214.5 223 49.3
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 1.2e-52 211.1 186 50.0
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 2.0e-50 203.8 344 39.0
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 6.4e-49 198.7 207 48.3
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 7.6e-42 175.3 155 55.5
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 1.1e-40 171.4 130 61.5
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 2.3e-38 163.7 247 39.3
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 3.9e-38 162.9 143 57.3
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 6.2e-36 155.6 286 35.3
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 8.1e-36 155.2 160 52.5
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 1.9e-32 144.1 137 54.7
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 1.9e-32 144.1 137 54.7
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 9.3e-24 115.2 90 61.1
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 1.9e-21 107.5 152 42.8
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 4.5e-18 96.3 59 76.3
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 5.9e-18 95.9 87 57.5
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 6.5e-17 92.4 285 26.0
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 7.4e-13 79.0 76 51.3
Lju897C0T7 Lonicera japonica HOM05D004754 ORTHO05D005566 1.5e-10 71.2 76 48.7
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 2.9e-09 67.0 75 45.3
Lju897C2T5 Lonicera japonica HOM05D004754 ORTHO05D005566 1.6e-07 61.2 66 47.0
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 6.1e-07 59.3 51 62.7


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