Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.2e-59 231.5 112 100.0
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.3e-49 199.5 115 82.6
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 3.0e-49 198.4 115 81.7
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 5.1e-49 197.6 113 83.2
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.6e-47 192.6 115 78.3
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-47 192.2 115 79.1
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 8.2e-47 190.3 115 78.3
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 1.1e-46 189.9 115 78.3
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 1.1e-46 189.9 115 78.3
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.2e-45 186.4 114 78.1
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 6.1e-42 174.1 103 79.6
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 6.3e-39 164.1 99 78.8
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 6.9e-38 160.6 89 91.0
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.6e-37 158.7 119 68.9
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 7.7e-29 130.6 108 58.3
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 2.2e-28 129.0 110 58.2
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 2.9e-28 128.6 107 57.0
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 2.9e-28 128.6 110 57.3
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 3.8e-28 128.3 110 57.3
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 3.8e-28 128.3 110 57.3
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 3.8e-28 128.3 110 57.3
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 3.8e-28 128.3 110 57.3
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 3.8e-28 128.3 110 57.3
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 5.0e-28 127.9 109 57.8
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 5.0e-28 127.9 109 57.8
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 5.0e-28 127.9 109 57.8
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 1.4e-27 126.3 109 56.9
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 1.9e-27 125.9 109 56.9
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 1.9e-27 125.9 109 56.9
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 7.2e-27 124.0 111 57.7
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.2e-26 123.2 110 55.5
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.2e-26 123.2 110 55.5
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.1e-26 122.5 108 53.7
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.7e-26 122.1 108 55.6
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 2.7e-26 122.1 128 52.3
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 4.7e-26 121.3 116 56.9
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 8.0e-26 120.6 116 56.0
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 8.0e-26 120.6 116 56.0
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 8.0e-26 120.6 120 55.8
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 1.0e-25 120.2 116 54.3
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 1.0e-25 120.2 117 50.4
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 1.4e-25 119.8 110 54.5
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 1.8e-25 119.4 123 51.2
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.3e-25 119.0 120 55.8
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.0e-25 118.6 124 53.2
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 3.9e-25 118.2 126 51.6
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 5.2e-25 117.9 125 51.2
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.1e-24 116.7 116 52.6
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 2.0e-24 115.9 127 50.4
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.6e-24 115.5 106 58.5
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 2.6e-24 115.5 111 52.3
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 2.6e-24 115.5 120 45.8
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 4.4e-24 114.8 120 50.0
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 4.4e-24 114.8 111 51.4
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 5.7e-24 114.4 126 49.2
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 7.4e-24 114.0 120 52.5
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 7.4e-24 114.0 110 50.0
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 9.7e-24 113.6 122 50.8
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 9.7e-24 113.6 115 52.2
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 9.7e-24 113.6 127 49.6
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 9.7e-24 113.6 119 52.1
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 9.7e-24 113.6 120 49.2
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 9.7e-24 113.6 120 49.2
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 1.3e-23 113.2 116 52.6
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.3e-23 113.2 120 49.2
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 1.3e-23 113.2 120 50.8
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.7e-23 112.8 119 51.3
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 2.2e-23 112.5 123 50.4
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 2.2e-23 112.5 120 53.3
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 2.2e-23 112.5 119 51.3
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 4.8e-23 111.3 95 55.8
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 4.8e-23 111.3 116 51.7
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 4.8e-23 111.3 131 45.0
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 4.8e-23 111.3 122 50.0
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 6.3e-23 110.9 117 50.4
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 6.3e-23 110.9 120 49.2
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 8.2e-23 110.5 126 48.4
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 8.2e-23 110.5 115 53.9
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.1e-22 110.2 123 45.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.4e-22 109.8 120 50.0
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.8e-22 109.4 110 55.5
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.8e-22 109.4 112 54.5
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.8e-22 109.4 112 54.5
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 3.1e-22 108.6 124 48.4
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.1e-22 108.2 123 49.6
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 4.1e-22 108.2 121 43.8
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 5.3e-22 107.8 125 48.8
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 7.0e-22 107.5 124 48.4
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 9.1e-22 107.1 126 50.8
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 9.1e-22 107.1 120 47.5
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 1.2e-21 106.7 128 47.7
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.2e-21 106.7 113 49.6
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.2e-21 106.7 113 49.6
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.2e-21 106.7 125 47.2
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 1.2e-21 106.7 121 48.8
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 1.6e-21 106.3 120 47.5
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 2.0e-21 105.9 125 44.8
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 2.0e-21 105.9 117 53.0
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 2.0e-21 105.9 122 47.5
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.6e-21 105.5 124 45.2
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 2.6e-21 105.5 128 45.3
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 2.6e-21 105.5 111 54.1
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 2.6e-21 105.5 132 42.4
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 3.5e-21 105.1 116 48.3
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.5e-21 105.1 116 48.3
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 3.5e-21 105.1 122 46.7
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.5e-21 104.8 107 53.3
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.5e-21 104.8 110 52.7
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 4.5e-21 104.8 120 47.5
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.5e-21 104.8 116 48.3
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 5.9e-21 104.4 114 47.4
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 5.9e-21 104.4 114 50.0
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 7.7e-21 104.0 117 50.4
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 7.7e-21 104.0 120 45.8
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 1.0e-20 103.6 127 44.1
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.0e-20 103.6 123 48.8
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 1.7e-20 102.8 120 45.8
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.2e-20 102.4 120 46.7
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.2e-20 102.4 124 48.4
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.9e-20 102.1 124 48.4
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 3.8e-20 101.7 123 48.0
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 3.8e-20 101.7 121 50.4
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 3.8e-20 101.7 120 45.8
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 3.8e-20 101.7 109 52.3
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 5.0e-20 101.3 112 50.9
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 5.0e-20 101.3 115 50.4
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 6.5e-20 100.9 126 49.2
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 6.5e-20 100.9 121 46.3
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 8.5e-20 100.5 122 43.4
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.1e-19 100.1 119 47.1
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 1.1e-19 100.1 120 44.2
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.1e-19 100.1 118 47.5
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 1.9e-19 99.4 101 51.5
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 2.5e-19 99.0 121 46.3
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 2.5e-19 99.0 109 50.5
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 3.2e-19 98.6 113 46.9
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 4.2e-19 98.2 110 49.1
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 4.2e-19 98.2 110 49.1
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.2e-19 98.2 124 45.2
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 5.5e-19 97.8 126 43.7
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 5.5e-19 97.8 128 46.1
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 5.5e-19 97.8 108 52.8
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 7.2e-19 97.4 102 54.9
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 9.4e-19 97.1 118 47.5
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 9.4e-19 97.1 118 47.5
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 9.4e-19 97.1 118 47.5
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 1.6e-18 96.3 118 44.1
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.6e-18 96.3 120 46.7
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 2.1e-18 95.9 123 44.7
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 2.1e-18 95.9 106 50.0
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 2.1e-18 95.9 120 45.8
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 2.7e-18 95.5 123 44.7
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 4.7e-18 94.7 101 55.4
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 6.1e-18 94.4 67 61.2
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 8.0e-18 94.0 114 45.6
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 8.0e-18 94.0 138 40.6
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 1.0e-17 93.6 106 40.6
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.4e-17 93.2 111 49.5
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 1.4e-17 93.2 112 47.3
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 3.0e-17 92.0 120 39.2
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 5.2e-17 91.3 102 48.0
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.5e-16 89.7 123 46.3
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 2.0e-16 89.4 124 44.4
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 2.6e-16 89.0 119 37.8
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 3.3e-16 88.6 117 41.0
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 4.4e-16 88.2 122 40.2
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 4.4e-16 88.2 115 46.1
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.3e-15 86.7 107 43.9
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 1.7e-15 86.3 114 48.2
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 8.2e-15 84.0 97 49.5
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.0e-14 80.9 151 37.7
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 1.2e-13 80.1 93 45.2
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 6.5e-12 74.3 142 34.5
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 6.5e-12 74.3 112 38.4
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 7.2e-11 70.9 121 38.8
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 6.1e-10 67.8 152 32.2
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 8.0e-10 67.4 159 33.3
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 2.3e-09 65.9 81 48.1
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 3.4e-08 62.0 153 30.7
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 1.1e-06 57.0 121 38.0
PSO223G0021 Papaver somniferum HOM05D002144 ORTHO05D002170 1.4e-06 56.6 120 33.3
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 4.1e-06 55.1 159 31.4
PSO386G0143 Papaver somniferum HOM05D002144 ORTHO05D002170 9.1e-06 53.9 120 33.3


User provided reference genes

Program Settings