Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 3.2e-40 167.9 82 100.0
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 7.4e-13 77.0 44 81.8
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 9.6e-13 76.6 44 79.5
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 2.8e-12 75.1 56 67.9
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 2.8e-12 75.1 56 67.9
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 6.2e-12 73.9 67 59.7
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 8.2e-12 73.6 69 62.3
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 8.2e-12 73.6 38 86.8
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 8.2e-12 73.6 53 66.0
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 1.1e-11 73.2 39 84.6
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 1.1e-11 73.2 39 84.6
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 1.1e-11 73.2 39 84.6
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 1.1e-11 73.2 39 84.6
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 1.1e-11 73.2 69 62.3
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 1.1e-11 73.2 54 68.5
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 1.1e-11 73.2 40 85.0
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 1.1e-11 73.2 38 89.5
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 1.1e-11 73.2 38 89.5
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.8e-11 72.4 38 89.5
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 2.4e-11 72.0 38 86.8
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 3.1e-11 71.6 38 86.8
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 4.0e-11 71.2 40 80.0
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 4.0e-11 71.2 40 80.0
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 4.0e-11 71.2 70 52.9
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 5.3e-11 70.9 38 86.8
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 5.3e-11 70.9 38 86.8
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 5.3e-11 70.9 37 89.2
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 6.9e-11 70.5 38 84.2
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 6.9e-11 70.5 38 84.2
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 6.9e-11 70.5 38 84.2
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 6.9e-11 70.5 38 84.2
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 6.9e-11 70.5 38 84.2
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 6.9e-11 70.5 38 84.2
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 6.9e-11 70.5 39 82.1
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 6.9e-11 70.5 41 78.0
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 9.0e-11 70.1 40 80.0
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 9.0e-11 70.1 38 84.2
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 1.2e-10 69.7 38 84.2
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 1.5e-10 69.3 38 81.6
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 1.5e-10 69.3 38 81.6
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 1.5e-10 69.3 38 84.2
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 1.5e-10 69.3 38 84.2
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.5e-10 69.3 47 68.1
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 1.5e-10 69.3 38 84.2
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 2.0e-10 68.9 38 84.2
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 2.0e-10 68.9 38 84.2
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 2.0e-10 68.9 38 84.2
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 2.6e-10 68.6 38 81.6
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 2.6e-10 68.6 38 81.6
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 2.6e-10 68.6 38 81.6
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 2.6e-10 68.6 38 81.6
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 2.6e-10 68.6 38 81.6
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 2.6e-10 68.6 38 84.2
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 2.6e-10 68.6 40 80.0
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 2.6e-10 68.6 40 77.5
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 3.4e-10 68.2 47 66.0
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 4.5e-10 67.8 38 81.6
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 4.5e-10 67.8 38 81.6
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 4.5e-10 67.8 38 81.6
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 4.5e-10 67.8 38 81.6
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 4.5e-10 67.8 38 81.6
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 5.8e-10 67.4 38 81.6
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 5.8e-10 67.4 38 78.9
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 5.8e-10 67.4 38 81.6
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 5.8e-10 67.4 38 81.6
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 7.6e-10 67.0 37 81.1
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 7.6e-10 67.0 38 81.6
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 7.6e-10 67.0 37 83.8
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 1.0e-09 66.6 37 81.1
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.0e-09 66.6 38 78.9
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.0e-09 66.6 38 81.6
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.0e-09 66.6 38 81.6
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.0e-09 66.6 38 81.6
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.0e-09 66.6 38 81.6
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 1.0e-09 66.6 37 83.8
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 1.3e-09 66.2 38 78.9
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 1.7e-09 65.9 37 81.1
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 1.7e-09 65.9 37 81.1
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.7e-09 65.9 38 78.9
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 2.2e-09 65.5 47 66.0
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 2.2e-09 65.5 37 81.1
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 2.2e-09 65.5 38 78.9
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 2.2e-09 65.5 38 76.3
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 2.9e-09 65.1 38 78.9
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 5.0e-09 64.3 38 78.9
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 5.0e-09 64.3 38 76.3
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 5.0e-09 64.3 38 76.3
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 6.5e-09 63.9 38 73.7
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 8.4e-09 63.5 37 75.7
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 8.4e-09 63.5 37 75.7
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 8.4e-09 63.5 38 78.9
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 8.4e-09 63.5 38 76.3
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 1.1e-08 63.2 37 75.7
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 2.5e-08 62.0 37 73.0
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 2.5e-08 62.0 37 70.3
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 2.5e-08 62.0 47 55.3
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 4.2e-08 61.2 39 69.2
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 4.2e-08 61.2 39 69.2
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 4.2e-08 61.2 47 59.6
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 7.1e-08 60.5 37 70.3
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 7.1e-08 60.5 38 71.1
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 7.1e-08 60.5 37 75.7
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 7.1e-08 60.5 37 73.0
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 9.3e-08 60.1 40 67.5
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 9.3e-08 60.1 61 52.5
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 1.2e-07 59.7 38 71.1
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 1.2e-07 59.7 38 71.1
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.2e-07 59.7 37 67.6
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 1.6e-07 59.3 39 66.7
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 1.6e-07 59.3 37 70.3
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 2.7e-07 58.5 38 71.1
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 4.6e-07 57.8 60 50.0
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 6.1e-07 57.4 49 55.1
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 1.0e-06 56.6 37 64.9
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 1.0e-06 56.6 37 64.9
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 1.0e-06 56.6 47 55.3
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 1.3e-06 56.2 37 67.6
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.3e-06 56.2 38 63.2
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 1.8e-06 55.8 37 62.2
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 3.9e-06 54.7 38 60.5
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 5.1e-06 54.3 38 60.5
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 5.1e-06 54.3 38 60.5
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 5.1e-06 54.3 38 60.5
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 6.7e-06 53.9 38 60.5


User provided reference genes

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