Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 3.7e-114 414.8 202 100.0
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.9e-71 272.3 199 66.8
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 2.3e-68 262.7 202 65.8
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 5.2e-68 261.5 202 65.3
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.2e-67 260.4 198 65.2
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.5e-67 260.0 198 65.2
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 2.0e-67 259.6 198 64.6
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 1.7e-66 256.5 200 65.5
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.7e-66 256.5 198 64.6
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.7e-66 256.5 198 64.6
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.7e-66 256.5 198 64.6
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 2.4e-65 252.7 198 64.1
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 5.4e-65 251.5 201 65.7
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.0e-64 249.6 201 65.2
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 2.7e-64 249.2 201 64.7
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.3e-60 236.1 196 62.8
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.5e-54 216.9 157 68.2
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 2.5e-54 216.1 173 62.4
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 9.5e-54 214.2 171 62.6
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.8e-53 212.6 166 65.1
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 3.6e-53 212.2 160 65.0
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 4.7e-53 211.8 162 64.2
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 6.2e-53 211.5 201 57.2
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 8.1e-53 211.1 160 64.4
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.1e-52 210.7 161 63.4
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 1.1e-52 210.7 200 56.5
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.1e-52 210.7 171 61.4
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 2.3e-52 209.5 164 64.0
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 3.1e-52 209.1 179 59.8
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 8.9e-52 207.6 180 60.6
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.2e-51 207.2 157 63.7
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.5e-51 206.8 157 64.3
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 2.6e-51 206.1 154 66.2
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 3.4e-51 205.7 158 63.9
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 3.4e-51 205.7 155 63.9
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.8e-51 204.9 159 62.9
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 7.6e-51 204.5 157 63.1
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.3e-50 203.8 167 61.7
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 2.2e-50 203.0 204 54.4
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 2.2e-50 203.0 159 59.7
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.2e-50 203.0 161 62.7
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.2e-50 203.0 161 62.7
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 2.2e-50 203.0 184 57.1
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.9e-50 202.6 200 55.0
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 2.9e-50 202.6 178 60.1
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.9e-50 202.6 205 54.6
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.9e-50 202.6 205 54.6
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.9e-50 202.6 196 56.6
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 3.7e-50 202.2 189 56.6
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 6.4e-50 201.4 153 63.4
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 6.4e-50 201.4 195 54.4
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.1e-49 200.7 163 59.5
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.1e-49 200.7 179 57.5
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 2.4e-49 199.5 159 59.1
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 3.2e-49 199.1 171 56.7
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 3.2e-49 199.1 159 59.7
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 4.1e-49 198.7 154 64.9
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 7.1e-49 198.0 172 57.0
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.1e-48 196.4 182 56.0
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 2.1e-48 196.4 200 55.0
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.7e-48 196.1 196 53.1
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 2.7e-48 196.1 162 58.6
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 6.0e-48 194.9 204 52.9
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.0e-47 194.1 190 55.3
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 3.9e-47 192.2 158 58.2
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 3.9e-47 192.2 154 60.4
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 5.1e-47 191.8 159 57.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 5.1e-47 191.8 212 50.9
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 8.6e-47 191.0 154 59.7
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.1e-46 190.7 160 59.4
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.1e-46 190.7 187 54.0
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.3e-46 188.7 154 59.1
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.6e-45 186.8 162 58.0
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.4e-44 183.7 134 64.2
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.8e-44 183.3 144 61.8
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.8e-44 183.3 199 51.3
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 2.4e-44 183.0 136 62.5
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 4.0e-44 182.2 131 66.4
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 8.9e-44 181.0 154 57.8
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 3.4e-43 179.1 157 54.8
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 3.4e-43 179.1 184 51.6
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 5.8e-43 178.3 157 56.7
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 3.8e-42 175.6 134 61.2
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.8e-42 175.6 197 47.2
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 7.1e-41 171.4 130 60.8
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.7e-40 169.5 156 51.9
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 2.7e-40 169.5 134 59.0
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.6e-35 152.9 135 57.0
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 9.9e-35 151.0 118 58.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 3.2e-33 146.0 149 50.3
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.1e-30 137.5 131 56.5
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 9.6e-30 134.4 122 50.8
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 2.8e-29 132.9 125 51.2
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.5e-27 127.1 117 50.4
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 3.4e-27 125.9 121 53.7
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 9.9e-27 124.4 206 36.9
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 4.9e-26 122.1 155 41.3
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 2.1e-24 116.7 164 40.2
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 6.7e-23 111.7 58 81.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 4.8e-21 105.5 117 42.7
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 4.0e-20 102.4 172 40.1
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 4.5e-19 99.0 152 34.2
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.0e-18 97.8 96 52.1
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.2e-18 96.7 110 49.1
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 4.3e-14 82.4 98 44.9
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 8.2e-13 78.2 116 35.3
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 5.7e-06 55.5 40 57.5


User provided reference genes

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