Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.8e-159 565.1 345 100.0
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 4.8e-106 388.7 355 71.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.1e-105 387.5 355 70.1
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 4.5e-104 382.1 357 68.1
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 2.2e-103 379.8 357 67.8
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 1.1e-97 360.9 357 65.8
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.0e-96 356.7 352 68.5
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.0e-96 356.7 352 68.5
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 4.5e-96 355.5 352 68.2
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 2.9e-95 352.8 352 67.3
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 6.5e-95 351.7 352 64.8
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 8.5e-95 351.3 352 66.5
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 3.3e-78 296.2 357 63.0
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 1.1e-73 281.2 367 47.4
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.7e-42 177.6 354 33.9
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.9e-41 174.1 361 34.3
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.4e-41 173.7 348 33.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 3.2e-41 173.3 330 35.5
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 3.2e-41 173.3 365 33.2
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.7e-39 167.5 362 32.0
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.0e-39 166.8 350 32.0
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.9e-39 166.4 298 37.2
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 3.9e-39 166.4 343 33.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 5.1e-39 166.0 354 32.8
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 6.6e-39 165.6 361 33.2
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.6e-39 165.6 350 32.0
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.7e-39 165.2 350 32.0
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 8.7e-39 165.2 362 32.0
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.1e-38 164.9 314 35.4
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 1.1e-38 164.9 373 30.8
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.5e-38 164.5 349 32.7
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.6e-38 161.8 350 31.7
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 2.8e-37 160.2 356 34.8
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 2.8e-37 160.2 350 39.1
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 3.6e-37 159.8 367 38.1
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 4.8e-37 159.5 347 32.9
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.8e-36 157.5 361 31.6
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.9e-36 155.6 354 31.1
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 9.9e-35 151.8 347 31.4
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 9.9e-35 151.8 363 32.5
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.7e-34 151.0 362 30.1
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.9e-34 150.2 351 31.6
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 3.8e-34 149.8 363 31.4
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.4e-33 147.9 358 30.2
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.4e-33 147.9 342 33.6
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 5.4e-33 146.0 361 31.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 7.1e-33 145.6 370 29.7
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.6e-32 144.4 377 30.8
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.1e-32 144.1 369 29.5
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 4.6e-32 142.9 301 34.2
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 6.0e-32 142.5 371 32.3
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 3.0e-31 140.2 347 32.0
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 3.9e-31 139.8 359 30.4
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 5.1e-31 139.4 362 29.8
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 8.7e-31 138.7 357 30.5
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 8.7e-31 138.7 327 30.3
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.5e-30 137.9 347 30.3
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 3.3e-30 136.7 310 34.5
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 3.3e-30 136.7 310 34.5
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 7.4e-30 135.6 324 35.2
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 7.4e-30 135.6 352 30.4
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 7.4e-30 135.6 374 30.2
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 9.6e-30 135.2 311 31.5
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.3e-29 134.8 311 31.5
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 1.3e-29 134.8 356 31.2
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.6e-29 134.4 322 31.7
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 2.1e-29 134.0 299 32.8
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.8e-29 133.7 359 30.1
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 3.7e-29 133.3 294 38.8
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.7e-29 133.3 315 29.5
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.8e-29 132.9 317 31.2
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 6.2e-29 132.5 311 31.2
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.1e-28 131.7 359 29.5
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 4.0e-28 129.8 299 30.4
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.2e-27 128.3 372 31.7
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 2.6e-27 127.1 328 29.9
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 2.6e-27 127.1 280 34.3
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 7.6e-27 125.6 292 32.2
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 9.9e-27 125.2 287 34.1
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 2.2e-26 124.0 322 29.8
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.2e-26 124.0 152 47.4
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 4.9e-26 122.9 326 31.0
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 8.4e-26 122.1 329 30.1
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.1e-25 121.7 299 28.8
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.1e-25 121.7 270 32.6
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.2e-25 120.2 135 48.9
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.2e-24 118.2 281 33.8
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 2.1e-24 117.5 285 32.3
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.7e-24 117.1 337 28.5
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.8e-23 114.4 349 28.9
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.8e-23 114.4 157 45.9
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 8.7e-23 112.1 264 29.2
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.5e-22 111.3 194 39.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.5e-22 111.3 237 33.8
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 2.1e-21 107.5 251 34.3
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 6.2e-21 105.9 239 35.1
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 8.2e-21 105.5 309 39.5
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.4e-20 104.8 309 39.5
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 2.0e-19 100.9 132 43.9
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.6e-19 100.5 288 30.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.7e-18 97.8 93 55.9
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 8.2e-13 79.0 237 30.8
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 6.9e-12 75.9 236 30.9
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 9.0e-12 75.5 253 26.1
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.0e-10 72.0 96 47.9
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 1.7e-10 71.2 112 39.3
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 6.5e-10 69.3 127 37.0
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.0e-07 62.0 119 31.9
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 1.8e-07 61.2 249 26.5
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 5.7e-06 56.2 175 23.4


User provided reference genes

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