Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 1.4e-131 473.0 241 100.0
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 8.9e-107 390.6 245 86.1
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 8.3e-105 384.0 245 83.7
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 5.4e-104 381.3 246 84.6
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 2.7e-103 379.0 245 83.7
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 4.0e-99 365.2 253 79.4
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 2.0e-98 362.8 246 81.3
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 2.6e-98 362.5 247 79.8
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 4.4e-98 361.7 250 80.0
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 7.5e-98 360.9 245 81.2
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 7.5e-98 360.9 245 81.2
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 2.2e-97 359.4 246 80.9
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 8.3e-97 357.5 251 78.9
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 8.3e-97 357.5 253 77.9
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 1.1e-96 357.1 248 79.8
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 3.1e-91 339.0 253 77.1
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 2.2e-89 332.8 242 71.1
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 2.7e-87 325.9 242 68.6
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.3e-86 323.6 243 70.4
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 1.3e-86 323.6 245 71.0
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 2.3e-86 322.8 243 70.4
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 3.0e-86 322.4 242 65.7
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 1.1e-85 320.5 223 78.9
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 1.9e-85 319.7 245 68.6
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 5.6e-85 318.2 242 66.9
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 7.3e-85 317.8 243 68.3
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 7.3e-85 317.8 242 66.9
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 9.5e-85 317.4 242 66.9
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 9.5e-85 317.4 253 68.0
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 4.7e-84 315.1 242 67.4
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 8.1e-84 314.3 242 65.7
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 6.8e-83 311.2 244 66.8
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 6.8e-83 311.2 242 66.1
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 2.6e-82 309.3 254 63.4
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 5.8e-82 308.1 242 66.9
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 5.8e-82 308.1 245 66.5
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 5.8e-82 308.1 245 68.6
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 7.6e-82 307.8 222 71.6
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 1.3e-81 307.0 245 67.3
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 2.2e-81 306.2 244 67.2
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 6.4e-81 304.7 246 66.3
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 6.4e-81 304.7 242 64.5
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 6.4e-81 304.7 245 67.8
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 1.1e-80 303.9 243 65.4
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 1.4e-80 303.5 243 65.0
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.4e-80 303.5 243 65.0
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.4e-80 303.5 243 65.0
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 1.4e-80 303.5 244 66.4
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.9e-80 303.1 243 65.0
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 2.4e-80 302.8 217 68.7
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 4.1e-80 302.0 244 66.0
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 5.4e-80 301.6 245 66.1
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 7.1e-80 301.2 245 65.7
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 9.2e-80 300.8 245 64.1
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 9.2e-80 300.8 249 64.3
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 1.2e-79 300.4 244 64.8
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 2.1e-79 299.7 243 64.2
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 2.1e-79 299.7 244 64.8
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 3.5e-79 298.9 243 65.4
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 3.5e-79 298.9 220 66.4
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 3.5e-79 298.9 245 64.1
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 4.6e-79 298.5 242 62.8
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 4.6e-79 298.5 244 63.9
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 7.8e-79 297.7 245 64.9
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 7.8e-79 297.7 242 64.9
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 1.0e-78 297.4 249 65.1
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 1.3e-78 297.0 242 65.3
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 1.3e-78 297.0 243 65.4
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 1.3e-78 297.0 244 65.6
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 1.3e-78 297.0 245 63.7
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 2.3e-78 296.2 242 63.6
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 3.0e-78 295.8 240 66.7
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 3.9e-78 295.4 241 66.4
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 3.9e-78 295.4 230 64.3
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 5.1e-78 295.0 225 66.7
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 6.6e-78 294.7 243 65.4
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 8.6e-78 294.3 246 65.0
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 4.3e-77 292.0 253 64.4
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 5.6e-77 291.6 244 64.3
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 7.3e-77 291.2 246 66.3
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 7.3e-77 291.2 254 63.4
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 9.6e-77 290.8 242 62.8
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 1.6e-76 290.0 246 65.4
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 6.2e-76 288.1 247 64.8
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 1.4e-75 287.0 241 65.1
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 1.8e-75 286.6 247 64.8
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 5.2e-75 285.0 209 67.0
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 6.8e-75 284.6 227 67.0
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 6.8e-75 284.6 250 62.4
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 1.5e-74 283.5 250 62.0
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 1.5e-74 283.5 189 75.1
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 1.5e-74 283.5 237 62.9
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 4.4e-74 282.0 190 72.1
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 2.2e-73 279.6 231 64.5
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 2.9e-73 279.3 244 62.3
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 2.9e-73 279.3 200 71.0
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 3.8e-73 278.9 220 64.1
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 8.4e-73 277.7 245 61.6
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 7.1e-72 274.6 245 62.4
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 7.1e-72 274.6 224 65.6
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 1.2e-71 273.9 245 61.2
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 2.1e-71 273.1 203 68.0
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 3.5e-71 272.3 233 62.7
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 4.6e-71 271.9 242 61.6
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 6.6e-70 268.1 242 59.1
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 5.6e-69 265.0 223 63.2
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 9.6e-69 264.2 246 60.2
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 9.6e-69 264.2 251 59.0
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 3.6e-68 262.3 184 70.7
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 9.9e-66 254.2 216 63.9
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 1.6e-63 246.9 168 72.6
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 2.1e-63 246.5 242 55.8
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 3.0e-62 242.7 247 54.7
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 1.4e-59 233.8 191 60.7
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 1.2e-55 220.7 206 61.7
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 6.7e-54 214.9 111 92.8
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 1.5e-50 203.8 121 78.5
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 2.6e-50 203.0 121 77.7
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 1.7e-49 200.3 120 78.3
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 7.4e-45 184.9 199 50.8
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 5.3e-43 178.7 191 48.7
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 9.0e-43 177.9 174 52.9
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.5e-42 177.2 186 50.0
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 2.9e-41 172.9 165 55.8
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 2.7e-39 166.4 174 49.4
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.3e-38 164.1 209 44.0
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 7.2e-32 141.7 173 43.9
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 2.2e-25 120.2 174 36.2
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 7.2e-24 115.2 68 76.5
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 5.5e-16 89.0 118 48.3
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 2.3e-14 83.6 162 28.4
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 6.3e-12 75.5 115 43.5
Nn2g10688 Nelumbo nucifera HOM05D005690 ORTHO05D007075 2.4e-11 73.6 101 44.6
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 2.0e-10 70.5 126 34.9


User provided reference genes

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