Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 9.6e-95 350.1 174 100.0
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 6.7e-72 274.2 173 82.7
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 3.3e-71 271.9 172 80.8
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 4.3e-71 271.6 172 82.0
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 1.2e-68 263.5 175 79.4
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.6e-68 262.3 174 80.5
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.3e-67 260.0 173 79.2
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.3e-67 260.0 171 78.9
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 5.0e-67 258.1 171 77.2
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 1.9e-66 256.1 172 77.9
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.9e-66 256.1 174 77.6
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 1.9e-66 256.1 172 77.9
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.9e-66 256.1 174 77.6
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 5.7e-63 244.6 171 74.9
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 7.4e-63 244.2 171 74.9
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 7.4e-63 244.2 171 74.9
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 6.3e-62 241.1 175 72.0
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 5.7e-47 191.4 170 61.8
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 5.7e-47 191.4 170 61.8
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.7e-38 163.3 170 55.9
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 3.7e-38 162.2 172 54.1
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 5.3e-37 158.3 179 55.9
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 9.1e-37 157.5 171 53.8
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.5e-36 155.2 179 57.0
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.3e-35 153.7 171 52.0
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 5.0e-35 151.8 180 51.1
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 6.5e-35 151.4 173 54.9
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.9e-34 149.8 180 51.1
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.9e-34 149.8 174 54.0
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.9e-34 149.8 174 54.6
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.5e-34 149.4 186 50.5
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 3.2e-34 149.1 173 54.9
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 8.0e-33 144.4 185 50.8
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 8.0e-33 144.4 170 50.0
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.4e-32 143.7 173 52.0
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 5.2e-32 141.7 185 49.2
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 8.8e-32 141.0 174 51.1
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 8.8e-32 141.0 175 50.3
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 8.8e-32 141.0 176 53.4
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 7.5e-31 137.9 182 49.5
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 7.5e-31 137.9 170 50.6
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 9.8e-31 137.5 169 52.7
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 1.3e-30 137.1 175 49.7
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.7e-30 136.7 170 51.8
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 4.8e-30 135.2 170 48.8
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.1e-29 134.0 144 52.8
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 2.4e-29 132.9 174 50.0
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 3.1e-29 132.5 98 67.3
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 5.4e-29 131.7 185 48.1
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 5.4e-29 131.7 93 73.1
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 5.4e-29 131.7 173 48.0
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.6e-28 130.2 169 50.9
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.6e-28 130.2 174 49.4
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 1.6e-28 130.2 98 70.4
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 2.7e-28 129.4 169 50.9
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 3.5e-28 129.0 175 49.1
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 3.5e-28 129.0 175 49.1
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 3.5e-28 129.0 171 45.0
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 4.5e-28 128.6 169 49.1
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.5e-28 128.6 180 46.7
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 7.7e-28 127.9 98 68.4
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.7e-27 126.7 176 49.4
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 5.0e-27 125.2 174 44.3
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.0e-27 125.2 172 47.1
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 2.5e-26 122.9 174 46.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.5e-26 121.7 178 44.9
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 9.5e-26 120.9 169 47.9
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.2e-25 120.6 92 69.6
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.6e-25 120.2 93 66.7
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 3.6e-25 119.0 179 45.3
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.6e-25 119.0 173 48.6
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.0e-24 117.5 172 42.4
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.0e-24 117.5 173 48.0
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.8e-24 116.7 177 42.9
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.3e-24 116.3 178 44.9
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.2e-24 115.2 173 48.6
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 5.2e-24 115.2 180 44.4
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 6.8e-24 114.8 173 48.6
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.8e-24 114.8 173 48.6
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 8.9e-24 114.4 181 44.2
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 8.9e-24 114.4 171 42.1
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.5e-23 113.6 173 46.8
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 2.6e-23 112.8 172 44.8
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 3.4e-23 112.5 143 47.6
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 7.5e-23 111.3 168 44.0
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 4.9e-22 108.6 175 44.6
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 8.3e-22 107.8 88 69.3
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 8.3e-22 107.8 170 44.7
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.4e-21 107.1 170 44.7
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 5.4e-21 105.1 94 60.6
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 2.0e-20 103.2 55 89.1
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 4.5e-20 102.1 96 58.3
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 1.1e-18 97.4 92 57.6
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.5e-18 97.1 175 44.0
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 7.3e-18 94.7 176 40.9
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.2e-17 94.0 69 71.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 3.6e-17 92.4 249 34.9
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 6.1e-17 91.7 148 40.5
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 3.4e-15 85.9 72 59.7
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 5.8e-15 85.1 160 38.1
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 9.8e-15 84.3 65 63.1
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.3e-14 84.0 143 37.8
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 2.9e-14 82.8 168 35.1
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 3.5e-12 75.9 152 39.5
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 1.7e-11 73.6 44 79.5
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 3.0e-11 72.8 153 42.5
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 3.9e-11 72.4 66 56.1
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 6.6e-11 71.6 148 38.5
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.9e-10 70.1 44 70.5
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.9e-10 70.1 76 48.7
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.3e-10 68.9 71 53.5
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 5.6e-10 68.6 138 39.9
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 5.2e-08 62.0 94 41.5
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.5e-07 60.5 109 41.3
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 1.7e-06 57.0 145 33.1


User provided reference genes

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