Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 0.0e+00 1310.4 688 100.0
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 1.2e-252 876.7 699 69.5
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 4.6e-249 864.8 695 68.9
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 3.2e-242 842.0 697 67.7
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 3.2e-242 842.0 697 67.7
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 3.2e-242 842.0 697 67.7
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 1.4e-234 816.6 716 66.1
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 4.2e-234 815.1 716 65.8
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 2.6e-228 795.8 696 64.8
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 2.5e-223 779.2 707 62.9
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.2e-219 766.1 695 64.0
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 3.4e-212 742.3 709 61.6
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 1.9e-194 683.3 698 59.3
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 5.3e-189 665.2 492 70.5
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 9.0e-120 435.3 725 40.8
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.5e-114 417.9 705 41.1
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.2e-110 404.1 737 39.2
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 1.9e-109 401.0 731 39.0
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.9e-109 401.0 737 38.9
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 4.8e-105 386.3 753 37.3
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 3.1e-104 383.6 736 37.4
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 2.2e-102 377.5 658 39.7
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.4e-101 374.8 726 39.0
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 1.4e-101 374.8 717 37.8
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.2e-101 373.6 723 37.8
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 7.9e-100 369.0 746 37.8
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.0e-99 368.6 731 36.9
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.0e-99 367.1 723 37.6
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.9e-99 366.7 741 37.2
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 7.4e-98 362.5 701 38.4
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 9.6e-98 362.1 752 36.0
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 4.8e-97 359.8 732 37.0
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.4e-96 358.2 635 41.3
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 4.0e-96 356.7 651 38.9
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 1.5e-95 354.8 719 38.4
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 3.4e-95 353.6 725 36.8
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 3.8e-94 350.1 735 35.0
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 4.9e-94 349.7 738 35.9
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.9e-93 347.8 706 36.8
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 3.2e-93 347.1 715 37.2
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 7.1e-93 345.9 710 38.2
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.7e-92 344.0 722 35.9
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 4.6e-92 343.2 651 39.6
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 5.1e-91 339.7 714 37.4
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 8.7e-91 339.0 736 36.1
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 8.7e-91 339.0 736 36.1
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 2.5e-90 337.4 732 35.1
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 3.3e-90 337.0 732 36.1
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 2.8e-89 334.0 724 34.1
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.1e-88 332.0 797 34.8
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 1.8e-88 331.3 723 32.5
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 7.7e-87 325.9 622 42.0
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 5.0e-86 323.2 784 36.1
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.4e-85 321.6 713 35.9
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 9.4e-85 318.9 648 35.6
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 6.7e-83 312.8 670 38.4
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 8.8e-83 312.4 651 36.1
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 6.3e-81 306.2 733 33.6
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 8.2e-81 305.8 717 34.9
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 1.1e-80 305.4 744 34.0
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 3.4e-79 300.4 722 33.4
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 4.5e-79 300.1 675 34.8
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 2.2e-78 297.7 725 32.0
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 5.0e-78 296.6 725 33.8
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 8.5e-78 295.8 788 31.7
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 1.4e-77 295.0 934 30.8
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 4.2e-77 293.5 538 38.5
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 5.5e-77 293.1 780 31.9
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 7.9e-76 289.3 669 33.8
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 6.7e-75 286.2 724 31.9
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 3.3e-74 283.9 647 33.2
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 7.4e-74 282.7 502 35.9
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 4.8e-73 280.0 742 33.0
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 5.3e-72 276.6 591 34.7
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 7.0e-72 276.2 667 33.9
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 1.0e-70 272.3 723 32.6
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 2.9e-70 270.8 286 53.8
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 4.7e-68 263.5 721 32.2
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.6e-66 257.7 746 30.4
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 7.4e-66 256.1 704 32.7
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.8e-64 251.5 289 53.3
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 7.0e-64 249.6 794 29.3
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.1e-60 238.0 733 30.2
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 2.2e-57 228.0 612 30.6
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 3.7e-57 227.3 519 32.6
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 1.9e-53 214.9 278 45.3
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 1.2e-52 212.2 677 30.9
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 4.1e-48 197.2 268 41.0
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 8.6e-46 189.5 226 48.2
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 4.9e-41 173.7 577 27.6
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 5.6e-37 160.2 420 33.1
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 1.9e-32 145.2 151 54.3
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 1.2e-28 132.5 151 51.0
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.5e-26 125.6 433 29.1
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 7.8e-23 113.2 207 40.1
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 1.3e-22 112.5 359 29.5
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 6.6e-22 110.2 169 44.4
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 7.3e-21 106.7 158 43.7
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 1.6e-20 105.5 375 28.8
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 8.1e-20 103.2 687 21.8
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.1e-19 102.8 133 46.6
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 3.2e-16 91.3 391 27.4
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 9.2e-16 89.7 342 28.7
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 6.0e-15 87.0 598 19.6
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 7.8e-15 86.7 122 40.2
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.0e-14 84.7 299 29.8
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 4.3e-13 80.9 239 31.8
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 5.6e-13 80.5 258 29.8
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 4.0e-11 74.3 178 36.0
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 8.9e-11 73.2 336 26.2
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 1.7e-09 68.9 55 63.6
Cpa.g.sc5137.1 Carica papaya HOM05D006140 ORTHO05D007834 6.0e-07 60.5 126 39.7
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 1.7e-06 58.9 108 40.7
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 3.9e-06 57.8 169 30.8
COL.COLO4_16906 Corchorus olitorius HOM05D006140 ORTHO05D007834 6.6e-06 57.0 110 37.3


User provided reference genes

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