Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 9.8e-225 783.1 385 100.0
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 2.7e-166 589.0 385 73.2
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 7.9e-166 587.4 383 74.4
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 7.4e-164 580.9 385 72.7
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 1.2e-161 573.5 385 71.9
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 2.0e-161 572.8 385 71.9
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 6.5e-160 567.8 381 73.0
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 6.1e-158 561.2 381 71.7
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 1.6e-150 536.6 388 68.0
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 4.7e-142 508.4 379 64.6
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 9.4e-135 484.2 349 67.3
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 7.0e-130 468.0 315 71.4
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 1.3e-112 410.6 337 57.0
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.1e-111 407.5 376 52.4
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 7.3e-111 404.8 329 57.8
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 1.6e-110 403.7 383 53.3
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 2.1e-110 403.3 360 55.6
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.6e-110 402.5 358 54.2
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 8.0e-110 401.4 378 53.2
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 5.2e-109 398.7 396 51.0
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 8.9e-109 397.9 359 52.6
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 3.4e-108 396.0 364 53.6
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 1.1e-106 391.0 386 52.1
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 1.1e-106 391.0 364 52.7
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 1.1e-106 391.0 370 52.2
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 1.1e-106 391.0 358 55.0
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 3.2e-106 389.4 359 53.5
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 2.0e-105 386.7 363 53.2
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 3.0e-104 382.9 358 53.4
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 3.9e-104 382.5 359 52.1
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 4.3e-103 379.0 353 52.1
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 1.4e-101 374.0 379 50.7
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 3.1e-101 372.9 338 53.0
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 5.2e-101 372.1 383 50.7
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 1.5e-100 370.5 372 51.6
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 2.6e-100 369.8 355 50.7
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 3.4e-100 369.4 360 51.4
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 5.8e-100 368.6 360 51.4
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.7e-99 367.1 334 53.0
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 1.7e-99 367.1 359 50.1
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 2.2e-99 366.7 354 52.5
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 3.2e-98 362.8 329 53.5
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 7.0e-98 361.7 339 52.5
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 1.6e-97 360.5 352 51.7
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 2.7e-97 359.8 378 50.3
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 3.5e-97 359.4 336 50.9
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 4.6e-97 359.0 382 49.2
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 4.6e-97 359.0 239 68.6
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 6.0e-97 358.6 382 49.2
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 1.3e-96 357.5 393 45.8
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 5.0e-96 355.5 357 49.0
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 1.5e-95 354.0 352 49.4
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 3.3e-95 352.8 364 49.7
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 9.5e-95 351.3 347 51.0
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 9.5e-95 351.3 349 49.6
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 6.2e-94 348.6 349 49.9
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 6.2e-94 348.6 328 51.2
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 6.2e-94 348.6 434 43.3
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 1.1e-93 347.8 339 49.6
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 1.8e-93 347.1 386 46.4
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 5.2e-93 345.5 358 48.0
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 8.9e-93 344.7 365 48.8
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.2e-92 344.4 358 47.8
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 1.5e-92 344.0 330 50.3
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 2.6e-92 343.2 347 50.7
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 5.8e-92 342.0 372 47.8
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 1.7e-91 340.5 364 46.4
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 2.2e-91 340.1 368 49.2
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 8.3e-91 338.2 364 46.7
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 1.1e-90 337.8 358 47.2
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 9.2e-90 334.7 301 53.2
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.6e-89 334.0 361 46.8
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.7e-89 333.2 344 47.1
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 6.0e-89 332.0 372 46.2
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 1.0e-88 331.3 364 47.8
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 9.5e-87 324.7 353 47.3
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.2e-86 324.3 366 46.4
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 4.7e-86 322.4 375 46.1
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 4.7e-86 322.4 388 44.1
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 8.1e-86 321.6 369 47.2
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 2.0e-84 317.0 375 44.8
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 2.6e-84 316.6 350 46.6
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 3.4e-84 316.2 387 44.7
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.1e-77 294.7 359 43.2
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 2.0e-76 290.4 329 45.3
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.2e-75 287.0 388 40.7
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 4.3e-71 272.7 335 44.2
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 6.9e-69 265.4 479 33.4
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 4.9e-67 259.2 231 54.5
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.1e-66 258.1 350 38.6
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 8.7e-64 248.4 268 45.9
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 1.9e-63 247.3 417 37.4
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 1.6e-62 244.2 226 58.0
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 3.5e-57 226.5 172 62.8
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 7.9e-57 225.3 273 44.7
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.8e-56 224.2 276 43.5
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 4.0e-53 213.0 306 38.2
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.4e-50 204.5 299 39.8
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 1.9e-50 204.1 186 53.2
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 9.3e-50 201.8 358 35.8
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.7e-49 200.3 239 43.5
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.3e-48 197.2 202 48.5
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 1.9e-47 194.1 283 38.5
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 5.1e-40 169.5 158 50.0
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.6e-36 157.1 326 32.5
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 3.6e-33 146.7 106 68.9
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 1.2e-28 131.7 246 30.1
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 1.3e-27 128.3 132 49.2
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 2.5e-26 124.0 186 40.9
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 2.7e-25 120.6 127 46.5
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 3.6e-25 120.2 190 34.2
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.4e-24 118.2 239 32.6
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 7.7e-20 102.4 273 28.6
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.7e-14 84.7 85 47.1
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 2.8e-14 84.0 102 41.2
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 5.0e-11 73.2 85 47.1
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 5.0e-11 73.2 93 39.8
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.1e-10 72.0 85 45.9
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 1.5e-10 71.6 115 38.3
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.9e-10 71.2 85 45.9
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.9e-10 71.2 85 45.9
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.8e-08 64.7 70 44.3
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.0e-08 63.9 70 44.3
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 3.7e-06 57.0 49 46.9


User provided reference genes

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