Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 2.3e-154 548.9 289 100.0
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 3.3e-140 501.9 289 87.9
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 2.1e-139 499.2 289 87.2
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 6.8e-138 494.2 289 86.2
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 1.3e-136 490.0 289 84.8
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.3e-136 490.0 289 86.2
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.3e-136 490.0 289 86.2
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.3e-136 490.0 289 86.2
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 2.2e-136 489.2 289 86.2
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 6.4e-136 487.6 289 85.8
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 3.2e-135 485.3 289 85.8
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 6.0e-134 481.1 289 82.7
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 1.1e-127 460.3 290 80.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 1.9e-119 433.0 280 76.1
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 2.4e-119 432.6 280 76.1
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 7.1e-119 431.0 280 76.4
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 9.3e-119 430.6 280 75.7
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 2.7e-118 429.1 280 76.8
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 4.6e-118 428.3 280 76.1
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 1.7e-117 426.4 279 74.9
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 1.7e-117 426.4 289 73.0
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 2.3e-117 426.0 283 73.1
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.1e-116 423.7 280 73.6
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.5e-116 423.3 279 73.5
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.5e-116 423.3 280 73.6
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 4.3e-116 421.8 279 72.8
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 4.3e-116 421.8 280 73.9
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 5.6e-116 421.4 279 76.3
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 7.3e-116 421.0 280 73.6
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 1.6e-115 419.9 279 73.1
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 2.1e-115 419.5 282 72.7
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 2.8e-115 419.1 280 72.9
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 2.8e-115 419.1 280 72.9
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 6.2e-115 417.9 279 71.7
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 8.1e-115 417.5 280 72.9
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 1.4e-114 416.8 280 74.6
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 2.4e-114 416.0 279 72.4
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 4.0e-114 415.2 279 71.3
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 9.0e-114 414.1 279 73.1
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 2.6e-113 412.5 280 72.5
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 7.6e-113 411.0 280 70.7
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 1.7e-112 409.8 280 73.2
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 2.2e-112 409.5 280 71.4
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 8.4e-112 407.5 283 73.5
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.1e-111 407.1 287 68.6
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 1.4e-111 406.8 280 71.4
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 1.4e-111 406.8 280 70.0
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 7.1e-111 404.4 282 68.4
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 4.6e-110 401.7 282 67.7
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 4.6e-110 401.7 282 70.9
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 1.8e-109 399.8 280 68.6
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.9e-108 396.4 285 68.4
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 2.5e-108 396.0 279 69.5
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 4.3e-108 395.2 280 68.2
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 7.4e-108 394.4 279 69.2
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 1.6e-107 393.3 282 68.8
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 4.8e-107 391.7 279 69.5
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 3.1e-106 389.0 280 67.5
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 4.0e-106 388.7 290 67.2
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 4.0e-106 388.7 279 70.3
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 5.3e-106 388.3 279 68.1
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 6.9e-106 387.9 279 68.1
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 1.5e-105 386.7 249 74.7
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 2.6e-105 386.0 286 67.8
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 4.5e-105 385.2 282 67.4
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 2.2e-104 382.9 283 67.1
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 2.9e-104 382.5 279 67.0
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 3.8e-104 382.1 280 67.5
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 8.4e-104 380.9 282 66.0
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 1.9e-103 379.8 280 68.2
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 1.9e-103 379.8 280 66.4
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 4.2e-103 378.6 284 64.8
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 5.5e-103 378.3 256 70.7
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 2.7e-102 375.9 285 65.6
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 2.7e-102 375.9 313 61.0
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 3.5e-102 375.6 283 64.0
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 3.5e-102 375.6 280 65.0
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 3.9e-101 372.1 280 67.5
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 3.3e-100 369.0 264 68.6
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 2.1e-99 366.3 280 63.6
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 6.9e-98 361.3 282 62.4
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 3.4e-97 359.0 288 60.4
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 7.6e-97 357.8 287 63.1
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 2.9e-96 355.9 283 62.2
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 1.2e-94 350.5 271 63.5
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.7e-94 349.4 282 61.7
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 4.6e-94 348.6 340 54.7
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 4.6e-94 348.6 283 60.4
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.0e-93 347.4 249 68.7
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.3e-93 346.3 283 60.4
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 8.7e-93 344.4 239 68.6
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 2.8e-91 339.3 200 85.0
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 4.8e-91 338.6 236 69.5
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 6.9e-90 334.7 236 71.6
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 6.9e-90 334.7 322 53.4
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 2.9e-88 329.3 292 60.6
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 2.5e-84 316.2 222 70.7
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 7.4e-84 314.7 283 54.4
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 9.1e-82 307.8 282 54.6
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 9.1e-82 307.8 283 53.0
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.2e-81 307.4 196 74.5
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 9.4e-79 297.7 280 56.1
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 6.3e-67 258.5 232 58.6
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 2.2e-64 250.0 285 50.5
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 4.5e-57 225.7 283 45.6
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.3e-56 224.2 141 75.2
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 5.5e-55 218.8 156 67.9
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 2.3e-48 196.8 319 37.9
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.8e-46 189.9 181 52.5
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 3.9e-40 169.5 330 37.3
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.1e-37 159.8 135 57.8
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 3.1e-37 159.8 116 68.1
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.9e-37 158.3 181 49.7
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 6.4e-35 152.1 116 67.2
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 8.3e-35 151.8 160 53.8
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 4.9e-27 125.9 95 63.2
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.3e-27 125.2 184 42.4
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 4.6e-25 119.4 161 42.9
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.3e-23 113.2 89 61.8
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.2e-12 78.2 145 40.7
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 1.7e-08 64.3 57 56.1
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.7e-08 62.0 57 54.4
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 5.6e-07 59.3 45 60.0
Actinidia20331 Actinidia chinensis HOM05D006393 ORTHO05D008088 6.2e-06 55.8 34 76.5


User provided reference genes

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