Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G5340 Aethionema arabicum HOM05D039724 ORTHO05D000006 2.7e-269 931.4 475 100.0
Aa31sc50G130 Aethionema arabicum HOM05D039724 ORTHO05D059347 9.2e-23 112.5 71 80.3
Aa31LG8G10190 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.4e-18 98.6 87 47.1
Aa31LG4G9750 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-18 97.4 87 42.5
Aa31LG1G2320 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.2e-18 96.7 93 41.9
Aa31LG5G21980 Aethionema arabicum HOM05D000848 ORTHO05D003342 8.9e-18 95.9 82 50.0
Aa31LG10G11440 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.8e-17 93.2 87 40.2
Aa31LG11G4990 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.8e-17 92.4 86 43.0
BcaB06g27916 Brassica carinata HOM05D000848 ORTHO05D003342 4.1e-15 87.0 87 42.5
Aa31LG8G10730 Aethionema arabicum HOM05D000003 ORTHO05D000006 5.4e-15 86.7 87 41.4
Aa31LG9G2500 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-14 84.3 88 39.8
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 4.6e-14 83.6 85 40.0
BcaC06g36724 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-13 82.0 85 44.7
Aa31sc2092G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.3e-13 81.3 88 43.2
BcaC01g04543 Brassica carinata HOM05D000848 ORTHO05D003342 2.3e-13 81.3 87 39.1
Aa31LG1G8410 Aethionema arabicum HOM05D000003 ORTHO05D000006 3.0e-13 80.9 76 43.4
Aa31LG5G19150 Aethionema arabicum HOM05D000003 ORTHO05D000006 3.9e-13 80.5 96 37.5
THA.LOC104804698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.1e-12 79.0 83 39.8
BcaC02g12080 Brassica carinata HOM05D000003 ORTHO05D000006 1.5e-12 78.6 88 40.9
BcaC07g38652 Brassica carinata HOM05D000848 ORTHO05D003342 1.9e-12 78.2 87 40.2
Aa31sc224G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.3e-12 77.0 84 36.9
Aa31LG10G9930 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.5e-12 75.9 98 37.8
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 9.5e-12 75.9 109 32.1
THA.LOC104820714 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 9.5e-12 75.9 83 34.9
Aa31LG4G16940 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.6e-11 75.1 74 47.3
THA.LOC104825266 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 1.6e-11 75.1 83 37.3
BcaC06g33259 Brassica carinata HOM05D028122 ORTHO05D032871 2.1e-11 74.7 88 39.8
BcaC08g45939 Brassica carinata HOM05D000003 ORTHO05D021943 2.1e-11 74.7 76 44.7
THA.LOC104806035 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 2.1e-11 74.7 83 38.6
THA.LOC104822217 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.1e-11 74.7 83 33.7
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 4.7e-11 73.6 109 31.2
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-11 73.2 110 34.5
BcaB07g32650 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-10 72.4 88 38.6
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-10 71.2 113 30.1
BcaC07g39546 Brassica carinata HOM05D000848 ORTHO05D003342 3.1e-10 70.9 70 41.4
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 5.2e-10 70.1 87 34.5
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.2e-10 70.1 84 36.9
BraA06t25612Z Brassica rapa HOM05D000003 ORTHO05D028000 6.8e-10 69.7 111 34.2
BraA05t20679Z Brassica rapa HOM05D000003 ORTHO05D000007 1.2e-09 68.9 84 35.7
Aa31LG4G12530 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.5e-09 68.6 87 31.0
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 2.0e-09 68.2 109 31.2
BcaC07g37541 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-09 68.2 110 30.0
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 3.4e-09 67.4 116 30.2
BcaC01g02774 Brassica carinata HOM05D000003 ORTHO05D000283 3.4e-09 67.4 87 34.5
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 3.4e-09 67.4 109 30.3
THA.LOC104801567 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.4e-09 67.4 78 38.5
THA.LOC104814698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.4e-09 67.4 84 34.5
BcaB01g00271 Brassica carinata HOM05D000003 ORTHO05D003342 4.4e-09 67.0 72 45.8
BolC5t30630H Brassica oleracea HOM05D000003 ORTHO05D000006 4.4e-09 67.0 116 29.3
Carub.0002s0096 Capsella rubella HOM05D000003 ORTHO05D000007 4.4e-09 67.0 137 28.5
CAN.G349.11 Capsicum annuum HOM05D000003 ORTHO05D000006 7.5e-09 66.2 131 29.8
THA.LOC104807977 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 7.5e-09 66.2 83 33.7
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 2.9e-08 64.3 76 38.2
BolC6t36722H Brassica oleracea HOM05D000003 ORTHO05D000006 3.7e-08 63.9 106 34.0
BolC9t55712H Brassica oleracea HOM05D000003 ORTHO05D000007 4.9e-08 63.5 74 39.2
BcaC07g39464 Brassica carinata HOM05D000003 ORTHO05D000006 6.4e-08 63.2 83 32.5
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 8.3e-08 62.8 110 30.0
Carub.0008s0629 Capsella rubella HOM05D000003 ORTHO05D000004 8.3e-08 62.8 87 31.0
BcaB03g14792 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-07 62.4 110 30.9
BcaC07g38923 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-07 62.4 85 32.9
THA.LOC104807150 Tarenaya hassleriana HOM05D000583 ORTHO05D000004 1.9e-07 61.6 110 29.1
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 3.2e-07 60.8 130 32.3
BcaC07g37192 Brassica carinata HOM05D000003 ORTHO05D000006 3.2e-07 60.8 87 39.1
Psat0s1357g0040 Pisum sativum HOM05D000003 ORTHO05D000006 4.1e-07 60.5 90 33.3
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 4.1e-07 60.5 90 33.3
Psat2g100080 Pisum sativum HOM05D000003 ORTHO05D000006 4.1e-07 60.5 90 33.3
Psat5g282240 Pisum sativum HOM05D000003 ORTHO05D000004 4.1e-07 60.5 90 33.3
BraSC37t46111Z Brassica rapa HOM05D000003 ORTHO05D000006 5.4e-07 60.1 43 53.5
Sopen00g004660 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-07 60.1 86 36.0
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-07 60.1 89 33.7
BcaB08g34556 Brassica carinata HOM05D000003 ORTHO05D000006 7.1e-07 59.7 87 34.5
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 7.1e-07 59.7 90 33.3
Sopen00g005560 Solanum pennellii HOM05D000003 ORTHO05D000006 7.1e-07 59.7 86 36.0
Aa31LG8G10100 Aethionema arabicum HOM05D039724 ORTHO05D000006 9.2e-07 59.3 64 34.4
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 9.2e-07 59.3 195 25.6
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 9.2e-07 59.3 210 23.8
C06p47640 Brassica napus HOM05D000003 ORTHO05D023841 9.2e-07 59.3 74 32.4
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-06 58.2 81 37.0
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-06 57.8 85 36.5
BcaC06g35997 Brassica carinata HOM05D000003 ORTHO05D003342 2.7e-06 57.8 85 31.8
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-06 57.8 85 31.8
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 3.5e-06 57.4 109 26.6
A03p34860 Brassica napus HOM05D000003 ORTHO05D000007 3.5e-06 57.4 101 32.7
C02p22170 Brassica napus HOM05D000003 ORTHO05D028000 3.5e-06 57.4 101 32.7
BolC2t08354H Brassica oleracea HOM05D000003 ORTHO05D028000 3.5e-06 57.4 101 32.7
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 3.5e-06 57.4 300 24.3
Nitab4.5_0000985g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.5e-06 57.4 71 35.2
EL10Ac2g03381 Beta vulgaris HOM05D000003 ORTHO05D000006 6.0e-06 56.6 85 35.3
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 6.0e-06 56.6 84 27.4
C08p08470 Brassica napus HOM05D000003 ORTHO05D028000 6.0e-06 56.6 287 27.9
THA.LOC104810236 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.0e-06 56.6 87 32.2
BcaC02g11219 Brassica carinata HOM05D000003 ORTHO05D000006 7.8e-06 56.2 85 30.6
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 7.8e-06 56.2 209 25.4


User provided reference genes

Program Settings