Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G5270 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.1e-216 756.5 392 100.0
Aa31sc475G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 9.7e-136 487.6 441 64.4
Aa31sc214G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.1e-91 341.3 444 47.3
Aa31LG4G11980 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.4e-81 307.8 275 64.0
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.3e-79 301.2 438 45.7
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 4.2e-78 296.2 451 43.2
Aa31sc296G50 Aethionema arabicum HOM05D003348 ORTHO05D000395 9.3e-78 295.0 377 46.9
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.6e-76 288.9 313 57.5
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.5e-75 287.7 443 44.0
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.3e-75 286.6 427 43.3
Aa31sc85G90 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.5e-67 260.4 171 80.7
Aa31sc510G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 8.4e-63 245.4 196 66.3
Aa31sc144G70 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.6e-58 231.1 337 42.4
Aa31sc129G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 4.6e-53 213.0 203 55.2
Aa31sc507G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.2e-50 202.6 203 53.7
Aa31LG6G9510 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.5e-48 198.0 167 65.3
Aa31LG6G9520 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.6e-48 197.2 182 64.3
Aa31sc360G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.8e-48 196.1 341 34.3
Aa31csc553G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.9e-44 183.3 223 46.2
Aa31sc172G60 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.1e-43 181.8 155 61.3
Aa31sc101G10 Aethionema arabicum HOM05D003348 ORTHO05D011028 8.2e-42 175.6 175 58.9
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 7.7e-40 169.1 244 42.6
Aa31LG4G11990 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.6e-37 160.2 120 73.3
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 4.3e-35 153.3 178 53.4
Aa31LG7G11520 Aethionema arabicum HOM05D003348 ORTHO05D000395 9.1e-33 145.6 269 40.1
Aa31sc38G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 7.2e-30 136.0 104 67.3
Aa31sc94G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.6e-29 134.8 123 57.7
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 1.0e-28 132.1 319 28.2
A04p00790 Brassica napus HOM05D003348 ORTHO05D011028 1.4e-28 131.7 282 30.1
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 1.4e-28 131.7 282 30.1
A09p49020 Brassica napus HOM05D003348 ORTHO05D011028 5.1e-28 129.8 319 28.2
A05p28530 Brassica napus HOM05D006890 ORTHO05D009907 1.0e-23 115.5 375 25.6
C03p65080 Brassica napus HOM05D006890 ORTHO05D009907 1.3e-23 115.2 375 25.6
Aa31LG9G5640 Aethionema arabicum HOM05D003348 ORTHO05D011028 3.8e-23 113.6 82 67.1
Carub.0027s0001 Capsella rubella HOM05D000975 ORTHO05D000395 5.0e-23 113.2 337 26.1
BcaC04g20415 Brassica carinata HOM05D006890 ORTHO05D009907 9.4e-22 109.0 356 24.7
BcaB01g00357 Brassica carinata HOM05D006890 ORTHO05D009907 4.7e-21 106.7 383 27.4
Carub.0001s3404 Capsella rubella HOM05D003348 ORTHO05D000395 6.1e-21 106.3 205 32.7
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 1.8e-20 104.8 282 27.3
Aa31sc479G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.0e-20 104.0 124 56.5
Aa31sc38G50 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.2e-20 103.2 69 73.9
BcaC03g16943 Brassica carinata HOM05D006890 ORTHO05D009907 8.8e-20 102.4 208 30.8
BraA05t21731Z Brassica rapa HOM05D003348 ORTHO05D011028 3.3e-19 100.5 283 27.2
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-18 98.2 277 27.1
Aa31LG1G10500 Aethionema arabicum HOM05D000975 ORTHO05D000395 3.7e-18 97.1 135 40.7
BolC2t06969H Brassica oleracea HOM05D006890 ORTHO05D009907 1.4e-17 95.1 194 29.4
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 2.4e-17 94.4 276 25.0
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 2.4e-17 94.4 276 25.0
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 3.1e-17 94.0 297 23.9
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 5.3e-17 93.2 248 25.8
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 5.3e-17 93.2 248 25.8
Aa31sc435G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.2e-16 92.0 150 39.3
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 1.2e-16 92.0 279 24.4
Carub.0002s0847 Capsella rubella HOM05D000975 ORTHO05D000395 2.0e-16 91.3 395 22.8
Carub.0020s0001 Capsella rubella HOM05D000975 ORTHO05D000395 5.9e-16 89.7 192 29.7
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 1.7e-15 88.2 258 24.8
C03p71540 Brassica napus HOM05D003348 ORTHO05D011028 2.2e-15 87.8 164 32.9
C01p09510 Brassica napus HOM05D000975 ORTHO05D000395 8.5e-15 85.9 358 25.1
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 8.5e-15 85.9 237 25.7
Aa31sc12G230 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.5e-14 85.1 373 26.8
BolC7t40724H Brassica oleracea HOM05D003348 ORTHO05D011028 1.9e-14 84.7 248 25.4
A04p08270 Brassica napus HOM05D006890 ORTHO05D009907 2.5e-14 84.3 180 31.1
A06p23390 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-13 82.0 205 30.2
A01p28030 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-13 81.6 205 30.2
A09p29840 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-13 81.6 383 25.6
Carub.0006s2603 Capsella rubella HOM05D000975 ORTHO05D000395 1.6e-13 81.6 207 27.1
A04p08250 Brassica napus HOM05D003348 ORTHO05D011028 2.1e-13 81.3 219 26.5
A01p33220 Brassica napus HOM05D000975 ORTHO05D000395 2.7e-13 80.9 205 29.3
C06p29660 Brassica napus HOM05D000975 ORTHO05D000395 3.6e-13 80.5 230 28.3
BcaC03g16877 Brassica carinata HOM05D006890 ORTHO05D009907 8.0e-13 79.3 403 24.3
Carub.0001s3406 Capsella rubella HOM05D003348 ORTHO05D000395 8.0e-13 79.3 320 22.8
A02p27520 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 79.0 407 25.1
A03p57780 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-12 78.6 201 29.4
C04p20990 Brassica napus HOM05D000975 ORTHO05D000395 1.8e-12 78.2 265 28.3
Aa31sc303G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.0e-12 77.4 58 70.7
A03p63720 Brassica napus HOM05D000975 ORTHO05D000395 3.0e-12 77.4 205 29.3
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 3.0e-12 77.4 244 26.6
BcaB01g01117 Brassica carinata HOM05D006890 ORTHO05D009907 4.0e-12 77.0 291 24.7
C02p45170 Brassica napus HOM05D000975 ORTHO05D000395 4.0e-12 77.0 198 27.8
C07p32050 Brassica napus HOM05D000975 ORTHO05D000395 4.0e-12 77.0 205 28.8
BolC5t33488H Brassica oleracea HOM05D000975 ORTHO05D000395 4.0e-12 77.0 205 28.8
A01p33200 Brassica napus HOM05D000975 ORTHO05D000395 8.8e-12 75.9 244 26.2
A02p27510 Brassica napus HOM05D000975 ORTHO05D000395 8.8e-12 75.9 198 27.3
A06p20320 Brassica napus HOM05D000975 ORTHO05D000395 8.8e-12 75.9 244 26.2
A06p27620 Brassica napus HOM05D000975 ORTHO05D000395 8.8e-12 75.9 198 27.3
A10p04890 Brassica napus HOM05D000975 ORTHO05D000395 8.8e-12 75.9 198 27.3
BraA01t03457Z Brassica rapa HOM05D000975 ORTHO05D000395 8.8e-12 75.9 244 26.2
BraA09t38545Z Brassica rapa HOM05D000975 ORTHO05D000395 8.8e-12 75.9 244 26.2
A09p24170 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-11 75.5 198 26.8
A09p29870 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-11 75.5 238 26.5
C03p75420 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-11 75.5 205 28.3
C08p13080 Brassica napus HOM05D006890 ORTHO05D042011 1.5e-11 75.1 170 28.8
A06p23370 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-11 74.3 244 25.8
C07p07380 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-11 74.3 205 28.3
C08p14280 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-11 74.3 205 27.8
BraA06t26265Z Brassica rapa HOM05D006890 ORTHO05D009907 7.5e-11 72.8 145 28.3
C02p09980 Brassica napus HOM05D000975 ORTHO05D000395 9.8e-11 72.4 198 27.3
C02p09990 Brassica napus HOM05D000975 ORTHO05D000395 9.8e-11 72.4 205 27.8
BolC9t58934H Brassica oleracea HOM05D003348 ORTHO05D013252 1.7e-10 71.6 201 24.9
A03p64300 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-10 70.9 242 25.2
A01p32770 Brassica napus HOM05D006890 ORTHO05D009907 3.7e-10 70.5 260 22.3
C09p43960 Brassica napus HOM05D000975 ORTHO05D000395 4.8e-10 70.1 205 27.8
A03p68250 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-09 68.9 383 25.3
BolC8t48937H Brassica oleracea HOM05D006890 ORTHO05D042011 1.1e-09 68.9 170 25.9
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 1.1e-09 68.9 272 25.0
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-09 68.6 324 24.7
Aa31sc185G90 Aethionema arabicum HOM05D006890 ORTHO05D009907 1.8e-09 68.2 68 45.6
Aa31sc38G30 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.4e-09 67.8 81 50.6
BcaC03g13688 Brassica carinata HOM05D006890 ORTHO05D009907 5.4e-09 66.6 346 21.7
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 5.4e-09 66.6 201 24.9
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 5.4e-09 66.6 249 22.9
C07p03240 Brassica napus HOM05D006890 ORTHO05D009907 5.4e-09 66.6 300 23.0
BolC3t21038H Brassica oleracea HOM05D000975 ORTHO05D000395 5.4e-09 66.6 206 27.2
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 5.4e-09 66.6 148 27.7
Thhalv10022492m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 5.4e-09 66.6 280 22.9
BcaC05g25944 Brassica carinata HOM05D006890 ORTHO05D009907 7.0e-09 66.2 331 23.0
BcaC05g27371 Brassica carinata HOM05D006890 ORTHO05D009907 9.1e-09 65.9 157 30.6
C09p26430 Brassica napus HOM05D000975 ORTHO05D000395 9.1e-09 65.9 192 27.6
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 9.1e-09 65.9 194 24.7
Aa31csc22G190 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.2e-08 65.5 39 84.6
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-08 65.5 297 20.9
A03p49050 Brassica napus HOM05D003348 ORTHO05D011028 1.2e-08 65.5 83 42.2
BcaC02g11614 Brassica carinata HOM05D006890 ORTHO05D009907 2.0e-08 64.7 337 23.4
Aa31LG4G1130 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-08 64.3 39 82.1
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-08 63.9 239 23.4
A03p57800 Brassica napus HOM05D000975 ORTHO05D000395 3.5e-08 63.9 184 26.6
A05p31260 Brassica napus HOM05D000975 ORTHO05D000395 3.5e-08 63.9 184 26.6
A09p29820 Brassica napus HOM05D000975 ORTHO05D000395 3.5e-08 63.9 184 26.6
C01p34250 Brassica napus HOM05D000975 ORTHO05D000395 5.9e-08 63.2 179 26.3
C04p13170 Brassica napus HOM05D006890 ORTHO05D009907 5.9e-08 63.2 138 26.8
BolC1t03394H Brassica oleracea HOM05D000975 ORTHO05D000395 5.9e-08 63.2 179 26.3
BcaC06g36006 Brassica carinata HOM05D006890 ORTHO05D009907 7.7e-08 62.8 154 27.9
BolC9t54115H Brassica oleracea HOM05D003348 ORTHO05D013252 1.0e-07 62.4 186 23.1
BraA09t39579Z Brassica rapa HOM05D000975 ORTHO05D000395 1.3e-07 62.0 371 23.7
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-07 60.8 215 27.0
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-07 60.5 236 24.2
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-07 60.5 193 23.3
A05p31280 Brassica napus HOM05D000975 ORTHO05D000395 3.8e-07 60.5 193 25.9
BolC7t40802H Brassica oleracea HOM05D003348 ORTHO05D011028 3.8e-07 60.5 116 28.4
BcaB05g23429 Brassica carinata HOM05D001285 ORTHO05D000199 5.0e-07 60.1 196 26.0
BcaB06g26759 Brassica carinata HOM05D001285 ORTHO05D000199 5.0e-07 60.1 194 26.8
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 5.0e-07 60.1 185 23.8
BolC2t10065H Brassica oleracea HOM05D001285 ORTHO05D000199 5.0e-07 60.1 235 24.7
Thhalv10011091m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 5.0e-07 60.1 236 25.0
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 6.5e-07 59.7 361 18.8
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 6.5e-07 59.7 361 18.8
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 8.5e-07 59.3 192 21.4
BraA02t07024Z Brassica rapa HOM05D000975 ORTHO05D000395 8.5e-07 59.3 370 22.7
BraA05t21729Z Brassica rapa HOM05D006890 ORTHO05D009907 8.5e-07 59.3 101 26.7
BraSC36t46028Z Brassica rapa HOM05D000975 ORTHO05D000395 8.5e-07 59.3 253 26.1
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-06 58.9 196 23.5
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-06 58.9 161 29.2
BraA09t38304Z Brassica rapa HOM05D000975 ORTHO05D000395 1.5e-06 58.5 182 26.4
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.5e-06 58.5 197 24.4
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 1.5e-06 58.5 236 22.9
AL8G16340 Arabidopsis lyrata HOM05D000975 ORTHO05D019714 1.9e-06 58.2 366 21.6
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.9e-06 58.2 233 21.5
BraA09t38305Z Brassica rapa HOM05D000975 ORTHO05D000395 1.9e-06 58.2 371 23.2
BcaC03g16251 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-06 57.8 202 24.8
A01p29560 Brassica napus HOM05D000975 ORTHO05D000395 2.5e-06 57.8 192 25.0
Thhalv10010916m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.5e-06 57.8 210 22.4
BraA02t08986Z Brassica rapa HOM05D000975 ORTHO05D000395 3.2e-06 57.4 182 25.8
BcaC04g19718 Brassica carinata HOM05D006890 ORTHO05D009907 4.2e-06 57.0 256 21.9
C02p32300 Brassica napus HOM05D000975 ORTHO05D000395 4.2e-06 57.0 156 28.2
C06p05210 Brassica napus HOM05D006890 ORTHO05D009907 4.2e-06 57.0 89 25.8
BraA06t23870Z Brassica rapa HOM05D000975 ORTHO05D000395 4.2e-06 57.0 182 25.8
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 5.5e-06 56.6 186 24.7
BcaB06g28181 Brassica carinata HOM05D006890 ORTHO05D009907 5.5e-06 56.6 313 22.4
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 5.5e-06 56.6 209 22.5
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 5.5e-06 56.6 206 25.2
Carub.0006s1872 Capsella rubella HOM05D000675 ORTHO05D003044 5.5e-06 56.6 116 31.9
Thhalv10017554m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.2e-06 56.2 211 24.2
A08p14770 Brassica napus HOM05D000975 ORTHO05D000395 9.4e-06 55.8 192 24.5
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 9.4e-06 55.8 277 20.9
BraA08t32985Z Brassica rapa HOM05D000975 ORTHO05D000395 9.4e-06 55.8 394 22.6


User provided reference genes

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