Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 2.2e-199 698.7 355 100.0
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 3.2e-137 492.3 372 73.4
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 3.9e-135 485.3 368 71.2
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 2.8e-133 479.2 368 70.1
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 1.1e-132 477.2 368 69.8
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 1.1e-132 477.2 368 69.8
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 1.1e-132 477.2 364 70.1
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 7.6e-131 471.1 373 69.7
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 1.8e-127 459.9 362 68.8
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 5.1e-127 458.4 368 67.7
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 8.7e-127 457.6 359 69.1
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 2.7e-120 436.0 387 62.3
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 9.0e-108 394.4 367 58.3
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 1.2e-107 394.0 360 60.6
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.5e-107 393.7 329 63.5
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 7.7e-107 391.3 380 57.6
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 5.0e-106 388.7 377 58.1
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 6.5e-106 388.3 376 58.8
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 1.4e-105 387.1 329 63.5
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 1.9e-105 386.7 295 68.1
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 2.5e-105 386.3 328 62.8
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 3.2e-105 386.0 330 63.9
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 4.2e-105 385.6 335 61.8
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 5.5e-105 385.2 328 62.5
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 9.4e-105 384.4 388 56.7
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 1.6e-104 383.6 281 69.8
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 7.9e-104 381.3 368 57.3
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 7.9e-104 381.3 368 56.8
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 1.0e-103 380.9 388 55.9
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 1.0e-103 380.9 387 56.6
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 1.0e-103 380.9 361 57.6
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 1.4e-103 380.6 338 60.1
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.8e-103 380.2 343 61.2
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 2.3e-103 379.8 329 62.6
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 3.9e-103 379.0 357 59.1
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 5.1e-103 378.6 390 54.1
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 6.7e-103 378.3 332 60.5
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 8.8e-103 377.9 356 57.9
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 1.3e-101 374.0 328 58.8
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 3.7e-101 372.5 336 59.8
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 4.8e-101 372.1 331 61.9
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 8.2e-101 371.3 329 61.7
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 8.2e-101 371.3 362 56.9
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 1.1e-100 370.9 327 61.5
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 1.4e-100 370.5 331 60.7
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 2.4e-100 369.8 388 54.4
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 4.1e-100 369.0 331 59.5
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 9.1e-100 367.9 341 57.2
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 1.5e-99 367.1 323 61.3
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 4.5e-99 365.5 351 56.7
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 7.7e-99 364.8 330 60.3
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 2.9e-98 362.8 380 53.7
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 6.5e-98 361.7 337 58.8
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 1.4e-97 360.5 330 61.2
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 2.5e-97 359.8 329 57.1
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 3.2e-97 359.4 329 59.3
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 4.2e-97 359.0 331 58.9
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 2.7e-96 356.3 334 60.2
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 6.1e-96 355.1 219 81.3
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 3.3e-94 349.4 221 77.8
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 3.3e-94 349.4 278 63.3
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 3.7e-93 345.9 197 83.8
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 5.9e-91 338.6 264 70.1
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 1.0e-90 337.8 367 52.3
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 1.3e-90 337.4 327 56.6
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 2.8e-85 319.7 322 56.8
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 2.2e-82 310.1 353 51.3
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 3.8e-82 309.3 298 61.1
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 7.7e-75 285.0 311 52.1
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 8.5e-74 281.6 303 54.1
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 4.2e-73 279.3 260 61.2
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 6.8e-71 271.9 263 56.7
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.5e-70 270.8 329 50.5
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 2.0e-70 270.4 148 87.2
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 3.7e-69 266.2 227 62.1
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 6.6e-66 255.4 277 50.2
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 4.0e-63 246.1 270 50.0
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 2.3e-58 230.3 250 52.4
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 1.2e-43 181.4 222 47.3
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 2.1e-43 180.6 211 49.8
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 5.8e-38 162.5 133 59.4
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 2.9e-37 160.2 133 57.9
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 9.6e-33 145.2 237 39.7
GSVIVG01028671001 Vitis vinifera HOM05D007814 ORTHO05D009902 5.8e-22 109.4 67 76.1
PRCOL_00001446 Prasinoderma coloniale HOM05D007814 ORTHO05D009902 1.6e-11 74.7 197 30.5
RcHm_v2.0_Chr6g0284811 Rosa chinensis HOM05D007814 ORTHO05D009902 2.1e-08 64.3 45 66.7


User provided reference genes

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