Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 7.6e-138 493.8 245 100.0
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 3.1e-99 365.5 235 77.4
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.6e-95 353.2 227 75.8
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.3e-94 350.1 229 76.4
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 3.0e-94 349.0 229 75.1
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 6.7e-94 347.8 233 73.4
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 8.7e-94 347.4 227 75.3
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 8.7e-94 347.4 227 75.3
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 9.7e-93 344.0 229 73.8
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.6e-92 343.2 227 74.9
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.4e-91 340.1 227 73.6
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 9.1e-91 337.4 217 74.7
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.5e-90 336.7 222 74.3
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.0e-89 334.0 226 70.8
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 6.5e-89 331.3 235 68.9
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 9.4e-88 327.4 220 70.9
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.1e-87 326.2 204 74.5
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 7.9e-87 324.3 223 69.5
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.8e-86 323.2 206 71.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.3e-86 322.8 210 71.9
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.0e-86 322.4 227 68.3
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.9e-86 322.0 222 68.9
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 3.9e-86 322.0 227 68.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 1.5e-85 320.1 200 73.0
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.5e-85 320.1 237 66.7
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 2.0e-85 319.7 220 69.1
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 2.0e-85 319.7 232 67.2
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.6e-85 319.3 206 71.4
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 5.7e-85 318.2 202 71.8
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 2.2e-84 316.2 227 67.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.7e-84 315.5 202 71.8
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 3.7e-84 315.5 223 67.3
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 8.2e-84 314.3 232 64.2
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 8.2e-84 314.3 232 65.1
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 4.1e-83 312.0 202 70.3
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 4.1e-83 312.0 200 72.0
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 6.9e-83 311.2 232 64.7
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 6.9e-83 311.2 202 70.8
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.5e-82 310.1 201 70.6
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.5e-82 310.1 233 64.4
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 2.6e-82 309.3 230 62.2
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.6e-82 309.3 234 63.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.7e-81 306.6 210 66.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 2.2e-81 306.2 211 72.0
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.2e-81 306.2 197 70.6
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.9e-81 305.8 234 62.8
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 2.9e-81 305.8 209 68.9
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.8e-81 305.4 202 70.8
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 5.0e-81 305.1 203 70.0
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 6.5e-81 304.7 202 70.3
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.5e-80 302.8 238 62.6
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.2e-80 302.4 222 66.2
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 3.2e-80 302.4 204 68.1
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 4.2e-80 302.0 204 66.7
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 5.5e-80 301.6 228 63.2
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 5.5e-80 301.6 201 70.1
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 9.4e-80 300.8 202 69.8
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-79 300.4 198 70.2
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.2e-79 300.4 234 64.1
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 1.2e-79 300.4 205 68.3
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.6e-79 300.1 226 62.8
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.6e-79 300.1 204 66.7
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.1e-79 299.7 232 62.9
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.7e-79 299.3 239 64.0
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 2.7e-79 299.3 230 61.7
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 3.6e-79 298.9 201 67.7
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.0e-78 297.4 236 63.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 3.0e-78 295.8 234 63.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.9e-78 295.4 252 58.3
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 5.2e-78 295.0 190 70.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 5.2e-78 295.0 234 62.4
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 8.8e-78 294.3 238 61.3
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.1e-77 293.9 240 60.4
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.6e-77 292.7 240 60.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 9.7e-77 290.8 249 61.4
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.7e-77 290.8 208 63.5
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 2.2e-76 289.7 222 60.8
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 2.4e-75 286.2 227 63.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.3e-75 285.0 205 63.9
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 7.0e-75 284.6 205 66.3
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 4.5e-74 282.0 233 59.7
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 5.9e-74 281.6 230 60.0
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.8e-73 278.9 204 65.2
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 3.2e-72 275.8 240 59.2
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 7.2e-72 274.6 206 64.1
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 9.4e-72 274.2 179 68.7
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.6e-71 273.5 279 51.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.7e-70 268.1 178 68.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 3.3e-69 265.8 200 62.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 7.5e-69 264.6 199 60.8
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 9.7e-69 264.2 202 62.4
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 7.0e-67 258.1 175 68.6
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 9.1e-67 257.7 224 57.6
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.0e-66 256.5 175 68.6
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.9e-64 250.0 198 58.6
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 7.2e-64 248.1 214 57.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 3.6e-63 245.7 181 64.1
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.2e-58 230.7 164 67.1
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.9e-57 226.1 161 64.6
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 5.0e-57 225.3 163 65.0
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 7.2e-56 221.5 210 46.7
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 4.9e-52 208.8 136 74.3
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.7e-47 192.2 183 53.6
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-45 187.6 114 74.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 5.7e-45 185.3 133 65.4
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 6.4e-44 181.8 167 52.1
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 6.8e-38 161.8 110 68.2
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.8e-37 158.7 113 66.4
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.4e-35 153.3 88 78.4
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 2.0e-34 150.2 84 83.3
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 2.7e-34 149.8 111 64.0
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 8.9e-30 134.8 89 73.0
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.9e-27 127.1 91 65.9
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 8.6e-25 118.2 88 62.5
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 3.3e-24 116.3 110 55.5
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 4.7e-23 112.5 89 58.4
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 6.8e-22 108.6 84 63.1
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 8.9e-22 108.2 70 65.7
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.0e-21 107.1 88 55.7
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 4.4e-21 105.9 79 62.0
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 4.1e-19 99.4 65 69.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 4.0e-14 82.8 68 54.4
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.2e-11 73.2 67 53.7
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 3.9e-09 66.2 52 57.7


User provided reference genes

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