Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 1.8e-135 486.1 278 100.0
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 4.0e-95 352.1 276 78.6
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 1.2e-94 350.5 278 75.9
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 2.0e-94 349.7 278 77.0
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 2.6e-94 349.4 275 75.6
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 3.4e-94 349.0 278 75.5
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 1.4e-92 343.6 308 71.4
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.4e-92 343.6 279 75.6
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 3.2e-92 342.4 278 73.7
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 2.1e-91 339.7 285 70.2
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 1.0e-90 337.4 308 70.8
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 1.1e-89 334.0 276 74.3
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 5.8e-86 321.6 273 61.9
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.4e-84 317.0 342 57.3
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 2.1e-83 313.2 279 67.4
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 2.3e-82 309.7 275 68.4
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 6.7e-82 308.1 276 68.5
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 1.1e-81 307.4 275 66.2
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 3.3e-81 305.8 277 70.8
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 6.9e-79 298.1 275 66.5
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 2.6e-78 296.2 273 67.8
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 4.5e-78 295.4 275 66.2
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 5.8e-78 295.0 276 65.6
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 7.6e-78 294.7 278 70.5
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.0e-77 294.3 210 68.1
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.7e-77 293.5 275 63.3
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 3.8e-77 292.4 274 64.6
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 3.8e-77 292.4 276 68.8
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 4.9e-77 292.0 277 67.5
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 8.4e-77 291.2 272 64.7
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 8.4e-77 291.2 271 62.7
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 1.1e-76 290.8 210 67.6
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 1.1e-76 290.8 279 68.1
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.1e-76 290.8 276 68.1
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.4e-76 290.4 208 68.3
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.9e-76 290.0 271 63.1
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 3.2e-76 289.3 286 53.8
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.2e-76 289.3 276 61.6
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 3.2e-76 289.3 277 66.1
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 4.2e-76 288.9 210 67.6
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 5.5e-76 288.5 273 55.7
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 9.3e-76 287.7 208 67.8
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 1.2e-75 287.3 283 65.7
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 1.6e-75 287.0 210 69.5
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.6e-75 287.0 210 68.6
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 2.7e-75 286.2 210 68.6
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 4.6e-75 285.4 210 67.1
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 7.9e-75 284.6 299 58.5
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 7.9e-75 284.6 273 65.9
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.0e-74 284.3 278 65.5
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.3e-74 283.9 210 67.1
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 1.8e-74 283.5 281 62.6
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 1.8e-74 283.5 276 62.3
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 3.9e-74 282.3 274 55.5
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 6.7e-74 281.6 210 65.2
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 8.7e-74 281.2 210 66.7
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.5e-73 280.4 210 65.7
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 2.5e-73 279.6 270 65.6
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 2.5e-73 279.6 210 66.2
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 3.3e-73 279.3 273 65.6
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 3.3e-73 279.3 325 55.4
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 5.7e-73 278.5 209 67.9
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 2.8e-72 276.2 210 65.2
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 4.8e-72 275.4 210 66.2
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 8.2e-72 274.6 278 60.4
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.1e-71 274.2 278 60.1
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 4.1e-71 272.3 209 64.6
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 6.9e-71 271.6 210 65.2
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.2e-70 270.8 210 63.8
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 3.4e-70 269.2 241 56.8
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 4.5e-70 268.9 304 59.5
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 7.7e-70 268.1 197 68.0
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 7.7e-70 268.1 198 67.7
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 7.7e-70 268.1 272 55.5
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 2.2e-69 266.5 200 66.5
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 2.9e-69 266.2 198 66.2
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 3.8e-69 265.8 210 64.8
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 1.9e-68 263.5 198 67.2
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 4.3e-65 252.3 277 59.9
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 5.7e-65 251.9 145 79.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 7.4e-65 251.5 146 81.5
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.3e-64 250.8 201 64.2
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 5.3e-63 245.4 235 56.2
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 9.1e-63 244.6 242 54.1
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.2e-62 244.2 146 78.1
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 1.4e-60 237.3 192 63.0
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 1.6e-59 233.8 147 72.8
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 4.7e-59 232.3 169 65.1
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 6.7e-58 228.4 278 49.6
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 1.5e-57 227.3 211 55.5
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 2.6e-57 226.5 210 54.3
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 5.3e-55 218.8 215 54.4
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.2e-54 217.6 227 53.7
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.0e-53 214.5 349 39.8
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 2.1e-51 206.8 125 80.8
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 1.0e-50 204.5 308 53.6
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 3.0e-50 203.0 154 68.2
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.2e-50 202.2 283 56.2
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 4.4e-49 199.1 278 52.2
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 6.3e-48 195.3 168 57.7
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.8e-45 186.0 131 67.9
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.1e-44 184.5 217 46.1
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 4.2e-44 182.6 198 66.7
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 9.7e-41 171.4 115 74.8
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 1.2e-38 164.5 109 70.6
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 2.3e-34 150.2 148 52.0
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 7.5e-33 145.2 145 53.8
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 9.8e-33 144.8 98 72.4
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 4.5e-30 136.0 81 80.2
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 5.7e-25 119.0 107 57.9
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 9.8e-25 118.2 150 64.0
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.6e-22 110.9 165 60.6
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 8.6e-21 105.1 112 52.7
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 6.4e-08 62.4 34 85.3
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 2.4e-07 60.5 37 75.7
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 2.7e-06 57.0 29 89.7


User provided reference genes

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