Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 4.0e-134 481.5 255 100.0
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 6.8e-81 304.7 239 72.0
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.8e-78 296.6 225 74.2
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 7.7e-77 291.2 235 70.2
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.0e-76 290.8 240 70.0
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 8.0e-74 281.2 243 68.7
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.4e-73 280.4 238 66.8
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 2.8e-71 272.7 235 66.4
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 2.4e-70 269.6 227 69.6
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 4.1e-70 268.9 222 67.1
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 5.4e-70 268.5 226 69.5
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 9.2e-70 267.7 233 63.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 3.5e-69 265.8 226 68.1
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 7.8e-69 264.6 228 68.0
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.9e-68 262.3 228 67.5
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 6.6e-68 261.5 222 67.6
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 1.2e-66 257.3 222 66.2
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 9.8e-64 247.7 224 62.5
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 1.7e-52 210.3 236 55.5
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 2.9e-47 193.0 238 51.7
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.1e-46 191.0 214 53.3
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 7.1e-46 188.3 204 52.5
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.2e-45 187.6 234 47.4
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.6e-45 187.2 170 59.4
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 2.7e-45 186.4 242 49.2
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 2.7e-45 186.4 239 47.3
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 4.6e-45 185.7 181 54.7
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 6.0e-45 185.3 238 50.4
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 1.3e-44 184.1 219 49.3
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 2.3e-44 183.3 219 50.2
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 3.0e-44 183.0 210 49.5
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 1.9e-43 180.3 201 50.2
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 4.3e-43 179.1 235 48.5
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 4.3e-43 179.1 196 51.5
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 7.3e-43 178.3 203 49.3
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 9.6e-43 177.9 244 44.7
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 1.2e-42 177.6 244 45.5
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.2e-42 177.6 224 47.3
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.6e-42 177.2 250 46.8
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 1.6e-42 177.2 197 52.8
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.1e-42 176.8 213 48.4
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 2.8e-42 176.4 199 50.8
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 2.8e-42 176.4 180 54.4
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 4.7e-42 175.6 241 46.1
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 4.7e-42 175.6 241 46.1
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 6.2e-42 175.3 233 46.8
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 8.1e-42 174.9 240 46.7
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 8.1e-42 174.9 254 46.5
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.1e-42 174.9 213 48.8
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 8.1e-42 174.9 159 59.1
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 8.1e-42 174.9 253 46.6
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.1e-41 174.5 228 47.4
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.1e-41 174.5 230 48.3
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.4e-41 174.1 240 47.5
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.4e-41 174.1 198 51.5
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 3.1e-41 172.9 202 48.5
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 4.0e-41 172.6 191 51.8
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.0e-41 172.6 186 52.2
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 6.8e-41 171.8 230 47.8
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 6.8e-41 171.8 203 47.8
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.9e-41 171.4 211 49.8
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 8.9e-41 171.4 234 46.6
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 8.9e-41 171.4 250 43.6
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 4.4e-40 169.1 188 52.1
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 4.4e-40 169.1 258 45.0
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 5.8e-40 168.7 220 45.0
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 1.3e-39 167.5 194 47.9
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.7e-39 167.2 197 50.3
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 1.7e-39 167.2 243 46.5
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.2e-39 166.8 199 46.7
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 2.2e-39 166.8 242 45.9
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 2.9e-39 166.4 176 47.7
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 3.8e-39 166.0 197 48.2
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 3.8e-39 166.0 240 46.2
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 6.4e-39 165.2 224 48.2
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 8.4e-39 164.9 253 43.5
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 8.4e-39 164.9 198 46.0
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.1e-38 164.5 206 45.1
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.4e-38 164.1 211 47.9
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.4e-38 164.1 240 42.9
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 1.9e-38 163.7 194 46.9
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 5.4e-38 162.2 240 45.4
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.3e-36 157.5 244 42.2
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.7e-36 157.1 161 50.9
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.7e-36 157.1 195 48.2
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 8.7e-36 154.8 223 42.6
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.5e-35 154.1 246 43.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 3.3e-35 152.9 190 46.3
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 7.3e-35 151.8 195 46.2
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.6e-34 150.6 241 43.2
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 2.8e-34 149.8 165 53.3
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 3.6e-34 149.4 178 51.7
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 3.6e-34 149.4 245 40.8
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 4.8e-34 149.1 198 43.9
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 8.1e-34 148.3 242 40.5
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.8e-33 147.1 201 43.3
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.8e-33 147.1 201 43.3
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 2.4e-33 146.7 122 59.0
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.3e-33 145.6 181 47.0
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.2e-32 144.4 250 40.4
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 7.6e-32 141.7 227 41.4
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.3e-31 141.0 227 41.4
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 2.2e-31 140.2 250 39.6
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.9e-31 139.8 185 48.1
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.1e-30 137.9 117 58.1
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 7.1e-30 135.2 230 39.1
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 2.7e-29 133.3 98 67.3
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 2.7e-29 133.3 148 50.0
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 7.9e-29 131.7 123 50.4
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.0e-28 131.3 145 51.7
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.7e-28 130.6 116 50.9
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.3e-28 130.2 167 43.7
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 4.3e-27 125.9 197 42.6
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.1e-25 121.3 247 36.8
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 2.6e-24 116.7 85 68.2
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.6e-24 116.7 118 50.0
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 2.4e-22 110.2 86 58.1
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 9.3e-22 108.2 134 42.5
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 2.1e-18 97.1 121 45.5
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 4.5e-16 89.4 123 48.8
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 1.9e-11 73.9 193 31.6
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 1.7e-07 60.8 97 44.3
TPR.G22067 Trifolium pratense HOM05D007016 ORTHO05D008847 9.3e-06 55.1 104 39.4


User provided reference genes

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