Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 0.0e+00 1437.9 778 100.0
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 0.0e+00 1076.2 784 74.6
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 1.6e-311 1072.4 782 74.4
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.4e-307 1059.3 782 72.5
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 1.9e-307 1058.9 771 73.5
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.2e-307 1058.1 783 72.9
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 7.4e-304 1047.0 782 72.1
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.4e-302 1042.7 779 72.3
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 9.0e-302 1040.0 784 72.6
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 7.1e-299 1030.4 783 73.7
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 8.7e-297 1023.5 781 72.1
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.5e-280 968.8 807 66.8
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.3e-260 903.3 782 65.3
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.3e-244 849.4 817 59.6
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.5e-240 836.6 780 62.2
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 5.2e-225 785.0 844 56.8
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 6.8e-225 784.6 846 53.7
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 3.4e-224 782.3 840 54.0
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.2e-222 775.8 848 53.2
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.8e-221 771.2 847 52.9
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.9e-220 768.8 846 54.0
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.9e-220 768.8 848 52.7
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.8e-218 762.7 847 55.6
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 7.1e-214 748.0 860 51.3
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 1.2e-213 747.3 849 52.1
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 7.8e-213 744.6 850 52.0
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.6e-212 741.1 827 54.2
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.3e-211 738.8 849 53.7
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.2e-210 737.3 831 51.7
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 3.6e-210 735.7 862 51.0
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 4.7e-210 735.3 846 51.4
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 8.1e-210 734.6 567 70.9
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 6.8e-209 731.5 821 52.1
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 3.4e-208 729.2 547 72.2
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 7.6e-208 728.0 856 50.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 1.1e-206 724.2 856 49.9
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.1e-206 724.2 854 49.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.1e-205 719.9 820 51.3
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 6.0e-205 718.4 820 50.6
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.3e-204 717.2 856 50.0
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.7e-204 716.8 855 49.9
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 5.1e-204 715.3 857 50.4
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.7e-204 714.5 845 49.5
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.1e-203 714.1 813 50.3
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 5.6e-203 711.8 823 50.4
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 5.6e-203 711.8 852 49.6
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 9.6e-203 711.1 842 49.4
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.6e-202 710.3 845 49.9
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 8.1e-202 708.0 846 50.1
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 8.1e-202 708.0 830 50.6
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.1e-201 707.6 887 48.6
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 3.1e-201 706.1 719 57.0
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 3.1e-201 706.1 849 50.1
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.1e-201 706.1 828 49.8
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 6.9e-201 704.9 829 49.7
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 9.0e-201 704.5 834 50.6
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 9.0e-201 704.5 829 49.6
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.5e-200 703.7 844 49.4
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.0e-200 703.4 822 50.2
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.9e-199 698.7 829 49.6
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 8.4e-199 698.0 833 49.6
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.3e-196 690.6 852 49.2
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 8.7e-196 688.0 842 48.8
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 2.5e-195 686.4 833 49.6
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.9e-193 678.3 854 49.4
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 9.0e-193 677.9 710 53.7
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.5e-192 677.2 853 48.4
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 2.6e-192 676.4 853 48.1
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 3.4e-192 676.0 850 48.0
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 3.8e-191 672.5 819 49.2
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.8e-191 672.5 848 48.9
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.4e-190 670.6 830 48.9
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 1.4e-190 670.6 962 44.0
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.0e-188 664.5 857 47.7
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.1e-187 661.0 856 47.1
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 8.1e-186 654.8 797 48.9
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 4.9e-183 645.6 876 46.9
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.0e-180 637.9 858 46.4
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 3.0e-180 636.3 846 46.2
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.9e-179 633.6 842 46.6
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.9e-179 633.6 830 47.1
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 7.4e-179 631.7 970 42.8
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.8e-177 627.1 860 45.2
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 4.0e-177 625.9 857 45.2
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 4.0e-177 625.9 856 46.0
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 6.9e-177 625.2 774 48.3
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 4.5e-176 622.5 819 44.7
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 1.0e-175 621.3 639 55.2
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 2.2e-175 620.2 843 45.2
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.9e-174 617.1 847 45.2
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 3.5e-173 612.8 807 45.7
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 4.6e-173 612.5 846 45.2
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 4.6e-173 612.5 843 45.4
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 7.9e-173 611.7 818 44.4
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.3e-172 610.9 810 45.4
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.9e-172 609.4 820 44.3
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 8.2e-170 601.7 843 45.1
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.4e-169 600.9 900 42.6
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.7e-167 594.0 809 44.7
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.2e-167 593.6 983 40.4
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.2e-167 593.6 840 44.3
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 7.2e-166 588.6 797 44.3
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 2.1e-165 587.0 830 42.8
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.6e-165 586.3 822 44.2
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 2.3e-164 583.6 841 43.8
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.3e-164 583.6 853 44.2
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.3e-164 583.6 844 44.5
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 3.0e-164 583.2 683 49.6
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.1e-163 581.3 791 44.4
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 1.9e-163 580.5 804 44.2
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.2e-162 577.0 853 43.1
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.4e-161 574.3 790 44.8
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 1.7e-159 567.4 847 45.7
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.5e-159 565.1 799 43.8
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.4e-158 564.3 786 45.0
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 4.2e-158 562.8 806 43.2
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.6e-155 553.5 850 42.8
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 7.4e-155 552.0 821 43.4
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.8e-154 549.3 679 48.5
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 4.8e-154 549.3 881 42.8
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 1.8e-153 547.4 783 43.4
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 5.9e-152 542.3 810 42.0
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 7.7e-152 542.0 816 42.0
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.7e-151 540.8 635 48.5
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 3.8e-151 539.7 846 42.3
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.2e-150 535.4 633 48.2
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.7e-143 514.2 895 38.9
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.1e-142 511.5 673 49.3
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.0e-140 505.0 649 47.3
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 4.4e-139 499.6 569 50.4
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.1e-134 485.0 583 47.2
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 7.5e-131 472.2 796 38.8
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 2.3e-127 460.7 817 38.2
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 4.0e-124 449.9 858 37.9
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 2.6e-123 447.2 628 43.8
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 4.4e-123 446.4 642 43.9
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 8.3e-122 442.2 613 44.4
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 8.3e-122 442.2 813 37.1
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.0e-120 437.6 875 34.9
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 3.7e-114 416.8 893 33.8
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.9e-106 390.6 796 33.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.9e-105 387.9 806 34.1
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 3.0e-103 380.6 786 33.8
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 5.6e-102 376.3 571 42.7
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 8.3e-98 362.5 734 37.2
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.9e-94 351.3 660 39.7
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.5e-91 341.7 303 63.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 2.4e-89 334.3 455 43.5
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.2e-81 307.0 418 45.5
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.3e-74 285.4 251 65.3
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 6.4e-74 283.1 251 72.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.3e-61 242.3 756 29.2
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 4.5e-59 233.8 192 67.7
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-52 212.6 672 27.8
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.9e-51 206.8 448 36.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 6.1e-40 170.2 352 36.4
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.3e-36 157.1 190 46.8
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 8.5e-34 149.8 117 61.5
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.0e-31 142.9 174 44.8
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.0e-30 138.7 292 32.9
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 5.7e-30 137.1 181 42.5
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 9.7e-30 136.3 283 36.0
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.3e-29 133.7 237 36.3
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.7e-24 118.2 156 52.6
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.1e-20 106.3 166 45.2
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 5.3e-20 104.0 111 54.1
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 8.5e-18 96.7 113 45.1
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.2e-15 87.4 95 53.7
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 5.7e-14 84.0 63 60.3
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.3e-13 80.5 109 47.7
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 5.4e-12 77.4 100 49.0
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 5.4e-12 77.4 82 46.3
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 9.1e-12 76.6 91 41.8
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.5e-11 74.3 100 48.0
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.8e-10 71.2 85 45.9
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 6.6e-10 70.5 58 48.3
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 6.6e-10 70.5 175 28.6
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 2.5e-09 68.6 47 59.6
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.1e-08 65.5 118 38.1
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-07 61.2 65 46.2
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 1.2e-06 59.7 105 39.0


User provided reference genes

Program Settings