Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.3e-166 589.7 311 100.0
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 9.7e-114 414.1 309 75.7
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 6.9e-112 407.9 309 75.1
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 6.9e-112 407.9 308 74.7
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 2.9e-110 402.5 310 74.8
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 5.0e-110 401.7 308 74.0
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.9e-109 399.8 315 72.4
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 4.2e-109 398.7 308 73.4
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 3.6e-108 395.6 309 73.1
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 7.9e-108 394.4 311 73.0
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.0e-107 394.0 309 72.8
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.0e-107 394.0 309 72.8
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 3.8e-102 375.6 322 66.8
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 4.2e-93 345.5 309 62.8
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 8.8e-91 337.8 311 62.4
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.3e-90 335.9 299 62.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 3.3e-90 335.9 311 62.1
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.3e-89 334.0 311 61.4
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.1e-88 330.9 312 58.7
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.4e-88 329.7 306 61.4
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 5.3e-88 328.6 309 60.2
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.9e-86 322.8 306 60.5
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 8.5e-86 321.2 318 58.8
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.5e-85 320.5 303 57.1
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.9e-85 320.1 309 59.9
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.6e-84 317.0 308 59.4
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.7e-84 316.2 312 58.3
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 2.7e-84 316.2 317 57.7
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.0e-83 314.3 310 57.1
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.8e-83 313.5 304 58.9
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.3e-83 313.2 254 65.7
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 5.2e-83 312.0 303 60.7
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 8.8e-83 311.2 300 57.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 1.5e-82 310.5 314 57.6
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 3.4e-82 309.3 305 57.0
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 3.4e-82 309.3 270 61.1
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 4.4e-82 308.9 304 57.6
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 7.5e-82 308.1 276 60.1
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 1.3e-81 307.4 307 57.7
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.7e-81 307.0 309 57.9
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 4.8e-81 305.4 316 57.6
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 4.8e-81 305.4 293 56.0
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 6.3e-81 305.1 293 59.0
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 8.3e-81 304.7 306 56.9
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 8.3e-81 304.7 309 57.3
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.1e-80 304.3 270 60.0
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 1.4e-80 303.9 308 56.5
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 1.8e-80 303.5 310 58.7
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 2.4e-80 303.1 296 59.8
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 4.1e-80 302.4 248 64.1
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 4.1e-80 302.4 293 57.3
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 7.0e-80 301.6 255 62.4
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 5.9e-79 298.5 279 59.5
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.7e-78 297.0 311 55.9
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 2.2e-78 296.6 289 59.5
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 4.2e-77 292.4 284 59.5
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 5.5e-77 292.0 306 54.9
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 7.2e-77 291.6 279 58.1
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 7.2e-77 291.6 305 56.1
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.2e-76 290.8 308 54.9
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.6e-76 290.4 225 67.6
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 3.6e-76 289.3 277 58.8
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.0e-75 287.7 304 56.6
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 6.8e-75 285.0 324 54.0
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.7e-73 279.3 271 57.9
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 4.9e-73 278.9 294 55.8
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 3.1e-72 276.2 253 60.5
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 3.5e-71 272.7 215 65.1
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 1.3e-70 270.8 317 53.3
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 3.8e-70 269.2 308 52.3
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 5.0e-70 268.9 212 67.9
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 6.6e-70 268.5 307 52.1
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 3.3e-69 266.2 333 49.5
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 5.5e-69 265.4 309 51.8
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.8e-68 263.1 305 52.5
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.7e-68 262.3 316 51.3
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 4.7e-68 262.3 341 47.5
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 6.1e-68 261.9 373 46.9
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.4e-67 260.8 316 51.6
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.4e-67 260.8 317 51.1
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.4e-67 260.8 252 56.3
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.6e-66 256.5 223 62.8
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.2e-65 253.4 249 56.2
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.8e-64 250.4 290 50.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.4e-64 250.0 248 60.9
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 4.1e-64 249.2 339 47.2
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 7.0e-64 248.4 229 58.1
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 4.6e-63 245.7 277 49.8
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 3.3e-61 239.6 320 50.0
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.2e-60 237.7 306 48.7
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 3.6e-60 236.1 251 57.0
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.1e-59 233.0 269 52.8
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.3e-57 227.6 302 50.7
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.7e-57 227.3 190 64.7
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 4.4e-50 202.6 221 55.2
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 1.6e-44 184.1 150 66.0
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 6.2e-44 182.2 256 40.2
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 3.1e-43 179.9 213 46.0
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 4.0e-43 179.5 329 39.8
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 3.0e-38 163.3 209 49.3
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 3.9e-38 162.9 236 39.4
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 8.1e-36 155.2 225 39.6
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 5.2e-35 152.5 134 62.7
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 8.9e-35 151.8 169 49.1
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 6.6e-30 135.6 158 49.4
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 8.7e-30 135.2 165 52.7
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 2.8e-28 130.2 120 60.8
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 6.2e-28 129.0 123 57.7
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 6.9e-27 125.6 184 42.9
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 6.9e-27 125.6 119 59.7
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.7e-25 120.9 211 40.3
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.9e-25 120.2 117 55.6
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.8e-25 119.8 119 55.5
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.6e-21 105.9 237 35.9
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.6e-15 86.3 109 50.5
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 1.3e-12 78.2 62 61.3
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.8e-11 74.3 102 46.1
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.9e-06 56.6 103 36.9
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.7e-06 55.8 103 43.7


User provided reference genes

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