Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 4.7e-92 341.3 184 100.0
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 4.0e-51 205.3 168 68.5
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 4.0e-51 205.3 168 68.5
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 4.0e-51 205.3 168 68.5
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 6.9e-51 204.5 169 68.0
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 6.9e-51 204.5 167 68.9
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.2e-50 203.8 171 67.3
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 3.4e-50 202.2 172 66.3
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 3.4e-50 202.2 162 67.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 3.8e-49 198.7 168 67.9
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 8.4e-49 197.6 165 66.7
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.9e-45 186.4 163 66.3
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 7.4e-45 184.5 179 59.8
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.8e-43 179.9 127 72.4
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 5.3e-43 178.3 114 77.2
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.5e-42 176.8 113 78.8
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.0e-42 176.4 132 72.0
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 4.5e-42 175.3 115 76.5
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 5.8e-42 174.9 119 75.6
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 7.6e-42 174.5 115 76.5
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.0e-41 174.1 114 77.2
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.0e-41 174.1 115 78.3
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.3e-41 173.7 120 76.7
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.7e-41 173.3 147 63.3
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.8e-41 172.2 114 75.4
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.9e-41 171.8 128 71.9
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 4.9e-41 171.8 112 76.8
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.9e-41 171.8 114 75.4
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.9e-41 171.8 114 75.4
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 6.5e-41 171.4 120 75.8
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 6.5e-41 171.4 122 72.1
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 6.5e-41 171.4 114 74.6
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 8.4e-41 171.0 115 72.2
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 8.4e-41 171.0 107 78.5
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.1e-40 170.6 131 71.0
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.1e-40 170.6 112 76.8
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 1.4e-40 170.2 127 67.7
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.4e-40 170.2 105 80.0
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.4e-40 170.2 103 83.5
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.4e-40 170.2 125 68.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.9e-40 169.9 122 71.3
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.9e-40 169.9 122 71.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.5e-40 169.5 118 72.9
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 2.5e-40 169.5 109 76.1
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 2.5e-40 169.5 142 64.1
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 3.2e-40 169.1 116 71.6
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 3.2e-40 169.1 142 63.4
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 3.2e-40 169.1 142 63.4
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 3.2e-40 169.1 121 71.9
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 4.2e-40 168.7 116 72.4
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 4.2e-40 168.7 116 72.4
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 4.2e-40 168.7 111 74.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 5.5e-40 168.3 151 62.9
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 5.5e-40 168.3 117 75.2
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 5.5e-40 168.3 141 62.4
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 5.5e-40 168.3 110 79.1
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 5.5e-40 168.3 151 62.3
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 5.5e-40 168.3 147 62.6
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 7.1e-40 167.9 151 62.3
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 9.3e-40 167.5 142 66.9
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 9.3e-40 167.5 120 74.2
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 9.3e-40 167.5 149 61.1
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.2e-39 167.2 138 67.4
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 1.2e-39 167.2 130 66.9
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.2e-39 167.2 147 63.9
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.6e-39 166.8 126 68.3
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.6e-39 166.8 184 53.8
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.6e-39 166.8 127 68.5
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.1e-39 166.4 114 72.8
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.7e-39 166.0 120 73.3
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.7e-39 166.0 110 78.2
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 3.5e-39 165.6 99 81.8
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 4.6e-39 165.2 114 72.8
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 4.6e-39 165.2 117 70.9
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 7.9e-39 164.5 120 69.2
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 7.9e-39 164.5 156 60.3
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.0e-38 164.1 120 68.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 1.8e-38 163.3 109 75.2
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.3e-38 162.9 139 62.6
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 2.3e-38 162.9 120 70.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 3.0e-38 162.5 117 70.9
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.9e-38 162.2 129 69.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 3.9e-38 162.2 111 73.0
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 5.1e-38 161.8 146 59.6
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.1e-38 161.8 114 71.9
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.7e-38 161.4 126 68.3
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 6.7e-38 161.4 117 69.2
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 8.7e-38 161.0 114 71.1
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 8.7e-38 161.0 102 76.5
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 8.7e-38 161.0 129 68.2
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 8.7e-38 161.0 120 67.5
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.9e-37 159.8 101 76.2
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 1.9e-37 159.8 115 69.6
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.5e-37 159.5 102 76.5
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 4.3e-37 158.7 128 65.6
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 5.7e-37 158.3 102 74.5
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 5.7e-37 158.3 139 62.6
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.3e-36 157.1 115 66.1
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 4.8e-36 155.2 117 68.4
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 9.0e-35 151.0 117 66.7
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 7.6e-34 147.9 137 59.9
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.4e-32 143.7 134 56.0
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 3.2e-32 142.5 121 58.7
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 3.5e-31 139.0 106 62.3
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 4.6e-31 138.7 133 55.6
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 6.3e-28 128.3 69 88.4
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.8e-27 126.7 97 67.0
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.6e-26 122.9 85 70.6
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.1e-24 117.5 133 45.9
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 3.6e-23 112.5 63 88.9
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 2.2e-20 103.2 95 51.6
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.1e-16 90.9 85 60.0
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 3.6e-15 85.9 78 51.3
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.8e-14 83.6 44 88.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 5.1e-14 82.0 63 65.1
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 8.2e-12 74.7 44 79.5
BcaC02g10904 Brassica carinata HOM05D006938 ORTHO05D008600 4.2e-08 62.4 137 38.7
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.8e-06 57.0 57 50.9


User provided reference genes

Program Settings