Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.3e-279 964.5 530 100.0
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.2e-191 673.7 547 70.6
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 2.0e-191 672.9 549 70.9
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 6.8e-184 647.9 502 69.5
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.8e-181 639.8 564 65.8
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 7.7e-180 634.4 482 74.9
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 4.0e-176 622.1 549 64.7
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.7e-172 609.4 539 65.3
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.5e-167 593.6 560 63.4
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 2.0e-167 593.2 560 63.2
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 2.6e-167 592.8 556 63.3
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 3.3e-162 575.9 478 67.4
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 3.3e-162 575.9 478 67.4
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 9.8e-159 564.3 524 61.1
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 8.1e-153 544.7 487 63.0
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.3e-139 500.7 456 61.6
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.2e-135 487.6 449 62.4
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 5.4e-133 478.8 415 63.1
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 6.2e-129 465.3 421 63.2
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.4e-128 464.2 412 62.1
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.4e-128 464.2 441 60.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.0e-127 460.3 452 59.1
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 5.8e-127 458.8 454 60.4
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.3e-126 457.6 458 59.4
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 2.9e-126 456.4 457 59.5
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 8.4e-126 454.9 455 59.3
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 8.4e-126 454.9 455 59.3
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.3e-121 441.0 357 66.9
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 4.6e-116 422.5 423 55.6
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.8e-115 420.6 528 49.2
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.8e-115 420.6 436 56.9
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.3e-115 420.2 417 54.9
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.9e-114 417.2 400 57.5
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 2.5e-114 416.8 433 55.7
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 3.3e-114 416.4 519 49.9
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 3.3e-114 416.4 412 57.3
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 4.3e-114 416.0 423 54.6
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 7.4e-114 415.2 416 55.3
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.1e-112 411.4 421 56.5
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.9e-112 408.7 540 47.6
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 5.9e-111 405.6 525 47.0
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.0e-110 404.8 387 58.4
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.8e-110 402.9 436 53.2
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 7.2e-109 398.7 501 47.3
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 7.2e-109 398.7 399 55.1
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.2e-108 397.9 426 54.5
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.2e-108 397.9 426 54.5
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 3.6e-108 396.4 426 54.5
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 3.6e-108 396.4 392 57.4
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 6.1e-108 395.6 402 54.2
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.8e-107 394.0 433 52.0
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.9e-107 392.9 402 55.5
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 5.1e-107 392.5 429 54.5
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 6.7e-107 392.1 392 58.2
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 1.1e-106 391.3 435 52.9
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.1e-106 391.3 396 56.6
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 4.3e-106 389.4 391 54.7
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 5.7e-106 389.0 418 51.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.8e-105 386.7 440 52.5
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 1.8e-104 384.0 388 56.2
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.8e-104 384.0 431 51.7
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.2e-103 381.3 402 54.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 2.0e-103 380.6 436 50.9
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 2.6e-103 380.2 402 54.0
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 3.4e-103 379.8 448 49.1
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.0e-102 378.3 442 50.5
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 2.2e-102 377.1 408 53.2
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.8e-102 376.3 424 51.2
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 3.8e-102 376.3 444 52.7
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.9e-101 374.0 394 51.3
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 9.4e-101 371.7 382 54.5
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 9.4e-101 371.7 442 48.9
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.6e-100 370.9 383 54.6
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 3.6e-100 369.8 518 45.4
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 3.6e-100 369.8 401 53.4
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 6.1e-100 369.0 411 50.1
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 7.9e-100 368.6 438 51.4
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.4e-99 367.9 392 53.3
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 3.0e-99 366.7 394 55.6
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 3.9e-99 366.3 390 54.4
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 2.0e-98 364.0 432 49.5
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 2.0e-98 364.0 393 53.7
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 5.7e-98 362.5 411 49.6
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 7.4e-98 362.1 518 44.4
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 7.4e-98 362.1 439 48.5
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 2.2e-97 360.5 428 51.4
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 3.7e-97 359.8 407 52.1
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 2.4e-96 357.1 374 52.1
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.4e-96 357.1 421 49.4
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 9.1e-96 355.1 461 47.5
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.2e-95 354.8 440 48.9
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 3.4e-95 353.2 512 43.6
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.0e-94 351.7 432 49.8
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.0e-94 351.7 396 52.5
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 2.9e-94 350.1 440 47.7
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.4e-93 347.8 422 48.1
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.2e-93 346.7 405 51.4
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 5.5e-93 345.9 440 47.3
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 5.5e-93 345.9 399 51.4
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 9.4e-93 345.1 375 50.9
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 8.0e-92 342.0 429 48.7
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 1.4e-91 341.3 400 49.8
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.3e-91 340.5 347 55.0
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.5e-90 337.8 519 43.2
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.6e-90 337.0 394 48.2
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 7.4e-90 335.5 363 51.8
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 8.2e-89 332.0 440 47.0
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.1e-88 331.6 369 51.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 5.3e-88 329.3 344 53.2
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 4.2e-85 319.7 417 46.5
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 7.2e-85 318.9 387 47.5
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 5.2e-83 312.8 348 51.7
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.2e-82 311.6 478 40.2
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 9.1e-80 302.0 420 45.0
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.3e-78 298.1 405 45.4
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.5e-77 294.7 356 46.9
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 4.7e-76 289.7 380 45.3
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.0e-75 288.5 394 44.9
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 4.8e-73 279.6 355 46.5
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.3e-70 270.8 289 50.9
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.5e-69 268.1 323 46.7
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.6e-68 264.6 394 43.7
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 2.8e-68 263.8 381 40.4
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.0e-67 260.0 313 46.3
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 3.4e-66 256.9 337 46.3
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.9e-61 241.1 220 56.8
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.3e-61 240.4 274 52.6
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.9e-59 232.3 224 54.9
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.0e-58 231.1 267 50.6
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.7e-57 226.9 288 46.9
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 6.4e-57 226.1 293 44.4
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.2e-56 223.8 220 54.1
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 4.1e-56 223.4 324 42.3
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 5.4e-56 223.0 234 53.4
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 3.9e-46 190.3 167 60.5
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 7.3e-45 186.0 278 41.7
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 5.2e-43 179.9 196 49.5
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 1.1e-37 162.2 385 33.5
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.2e-31 142.1 374 33.2
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 2.3e-30 137.9 400 32.5
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 6.2e-28 129.8 153 47.7
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.1e-27 129.0 285 33.3
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 6.9e-27 126.3 172 50.0
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 9.0e-27 125.9 180 47.2
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.6e-23 115.2 162 45.7
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.7e-22 111.7 466 28.1
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 7.6e-18 96.3 108 50.0
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.9e-17 93.6 140 37.9
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 7.9e-07 59.7 50 58.0


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