Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G16900 Aethionema arabicum HOM05D002873 ORTHO05D002978 2.1e-13 78.6 68 100.0
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.7e-10 68.9 68 82.4
SpUn0185_0020 Schrenkiella parvula HOM05D002873 ORTHO05D002978 7.0e-09 63.5 68 85.3
Thhalv10015216m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 9.1e-09 63.2 68 73.5
C09p43800 Brassica napus HOM05D002873 ORTHO05D002978 1.2e-08 62.8 68 76.5
BolC9t57265H Brassica oleracea HOM05D002873 ORTHO05D002978 1.2e-08 62.8 68 76.5
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 1.6e-08 62.4 68 69.1
BcaB08g35740 Brassica carinata HOM05D002873 ORTHO05D002978 4.5e-08 60.8 68 75.0
A10p11190 Brassica napus HOM05D002873 ORTHO05D002978 5.9e-08 60.5 68 73.5
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 5.9e-08 60.5 61 57.4
AL7G51680 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 7.7e-08 60.1 68 83.8
AL8G28870 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 7.7e-08 60.1 68 73.5
Carub.0007s3711 Capsella rubella HOM05D002873 ORTHO05D002978 7.7e-08 60.1 68 83.8
CARHR266960 Cardamine hirsuta HOM05D002873 ORTHO05D002978 7.7e-08 60.1 68 75.0
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 1.3e-07 59.3 68 50.0
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 1.3e-07 59.3 68 50.0
BraA10t43210Z Brassica rapa HOM05D002873 ORTHO05D002978 1.3e-07 59.3 68 70.6
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 1.7e-07 58.9 63 50.8
AT5G53820 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 2.3e-07 58.5 68 69.1
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 2.3e-07 58.5 68 75.0
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.3e-07 58.5 68 67.6
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 64 57.8
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.9e-07 58.2 68 50.0
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 48.5
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 48.5
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 48.5
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 3.8e-07 57.8 64 50.0
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 6.6e-07 57.0 65 81.5
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 6.6e-07 57.0 68 66.2
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 6.6e-07 57.0 68 66.2
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 6.6e-07 57.0 68 63.2
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 6.6e-07 57.0 66 71.2
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 8.6e-07 56.6 65 80.0
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 8.6e-07 56.6 65 60.0
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 8.6e-07 56.6 65 60.0
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 1.1e-06 56.2 61 73.8
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 70.6
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 47.1
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 47.1
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 47.1
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 60.3
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 57.4
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.5e-06 55.8 65 75.4
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 47.1
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 65 67.7
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 1.9e-06 55.5 68 70.6
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 69.7
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 2.5e-06 55.1 65 61.5
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 3.3e-06 54.7 68 54.4
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.3e-06 54.7 65 64.6
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.3e-06 54.7 66 66.7
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 3.3e-06 54.7 68 70.6
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 45.6
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 45.6
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 70.8
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 5.5e-06 53.9 68 45.6
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 46.2
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 5.5e-06 53.9 68 64.7
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 5.5e-06 53.9 68 64.7
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 7.2e-06 53.5 65 61.5
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 7.2e-06 53.5 65 63.1
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.2e-06 53.5 65 75.4


User provided reference genes

Program Settings