Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 7.7e-67 256.9 122 100.0
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.5e-46 189.5 157 61.1
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.5e-46 189.5 157 61.1
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.7e-45 186.0 157 60.5
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 4.9e-45 184.5 157 61.1
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 6.4e-45 184.1 156 60.3
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 1.4e-44 183.0 157 59.9
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 1.4e-44 183.0 157 59.9
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.4e-44 182.2 157 59.9
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.4e-44 182.2 157 59.9
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 2.4e-44 182.2 154 61.0
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 9.2e-44 180.3 157 59.9
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 3.3e-41 171.8 158 57.6
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 2.9e-37 158.7 100 75.0
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 3.2e-36 155.2 145 54.5
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 4.6e-35 151.4 92 72.8
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 7.8e-35 150.6 92 71.7
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.3e-34 149.8 92 73.9
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.0e-34 148.7 142 52.8
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.1e-34 147.9 92 71.7
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.1e-34 147.9 92 71.7
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 5.1e-34 147.9 154 49.4
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 6.6e-34 147.5 154 50.6
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.6e-34 147.5 92 71.7
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.1e-33 146.7 154 50.0
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 5.6e-33 144.4 92 69.6
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 5.6e-33 144.4 116 63.8
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 7.3e-33 144.1 92 68.5
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 9.6e-33 143.7 157 52.2
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 9.6e-33 143.7 157 52.2
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 9.6e-33 143.7 92 71.7
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.1e-32 142.5 90 72.2
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 2.8e-32 142.1 92 69.6
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 3.6e-32 141.7 92 70.7
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 4.7e-32 141.4 89 74.2
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 6.2e-32 141.0 92 72.8
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 6.2e-32 141.0 95 70.5
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.1e-31 140.2 92 69.6
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.4e-31 139.8 99 66.7
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 1.4e-31 139.8 92 71.7
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.4e-31 139.8 93 72.0
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.4e-31 139.8 93 72.0
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.4e-31 139.8 93 72.0
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 2.4e-31 139.0 102 66.7
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 2.4e-31 139.0 92 67.4
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.4e-31 139.0 92 72.8
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 3.1e-31 138.7 93 71.0
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 4.0e-31 138.3 90 70.0
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 4.0e-31 138.3 89 69.7
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 5.2e-31 137.9 92 67.4
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 1.2e-30 136.7 92 73.9
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.2e-30 136.7 92 69.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.2e-30 136.7 153 45.8
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 1.5e-30 136.3 92 70.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.5e-30 136.3 88 70.5
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.0e-30 136.0 87 73.6
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 2.0e-30 136.0 98 65.3
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 2.6e-30 135.6 88 70.5
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.4e-30 135.2 88 69.3
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 3.4e-30 135.2 109 62.4
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 5.8e-30 134.4 87 72.4
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 5.8e-30 134.4 87 70.1
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 5.8e-30 134.4 87 70.1
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 5.8e-30 134.4 86 70.9
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 1.3e-29 133.3 95 68.4
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.3e-29 133.3 87 70.1
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.3e-29 133.3 88 67.0
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 2.2e-29 132.5 87 72.4
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 2.2e-29 132.5 92 68.5
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 2.2e-29 132.5 92 68.5
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 4.9e-29 131.3 92 66.3
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 4.9e-29 131.3 95 65.3
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 4.9e-29 131.3 87 69.0
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 4.9e-29 131.3 92 67.4
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 6.4e-29 131.0 95 61.1
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 6.4e-29 131.0 92 67.4
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 8.4e-29 130.6 89 70.8
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.1e-28 130.2 93 65.6
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.4e-28 129.8 87 70.1
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.4e-28 129.0 93 66.7
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.4e-28 129.0 105 61.0
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 3.2e-28 128.6 84 71.4
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 3.2e-28 128.6 89 69.7
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 4.2e-28 128.3 80 75.0
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.2e-27 126.7 97 63.9
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 2.1e-27 125.9 95 64.2
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 2.7e-27 125.6 91 65.9
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 4.6e-27 124.8 75 77.3
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 4.6e-27 124.8 88 65.9
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 1.7e-26 122.9 87 65.5
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 1.1e-25 120.2 138 44.9
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.5e-22 109.8 86 57.0
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 4.2e-20 101.7 86 51.2
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.1e-19 99.4 82 53.7
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 4.6e-19 98.2 89 55.1
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 2.3e-18 95.9 80 55.0
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 3.0e-18 95.5 71 63.4
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 6.6e-18 94.4 72 61.1
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.9e-17 92.8 70 61.4
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.4e-12 76.6 48 70.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 2.5e-09 65.9 49 61.2


User provided reference genes

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