Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 2.7e-277 958.0 475 100.0
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.2e-224 783.1 478 81.0
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 1.3e-223 779.6 476 81.5
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 6.6e-223 777.3 465 81.9
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 7.3e-222 773.9 470 82.6
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 8.1e-221 770.4 476 80.5
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 7.4e-214 747.3 478 78.5
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 2.0e-195 686.0 477 71.7
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 2.5e-190 669.1 426 77.9
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 2.7e-184 649.0 403 80.4
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 2.7e-184 649.0 426 76.3
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 9.7e-174 614.0 450 67.8
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 1.2e-171 607.1 431 69.6
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 5.9e-171 604.7 438 67.8
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 7.7e-171 604.4 438 67.8
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 1.0e-170 604.0 443 67.7
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 8.5e-170 600.9 419 69.9
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 3.2e-169 599.0 424 69.3
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 7.2e-169 597.8 430 68.4
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 9.4e-169 597.4 420 69.8
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 1.6e-168 596.7 427 67.7
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 3.0e-167 592.4 424 68.6
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.2e-166 590.5 445 64.5
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 4.4e-166 588.6 445 65.6
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 9.7e-166 587.4 466 62.9
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 9.7e-166 587.4 444 65.1
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.2e-165 586.3 431 66.6
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 2.8e-165 585.9 444 64.9
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 6.3e-165 584.7 425 66.6
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 8.2e-165 584.3 445 65.2
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.4e-164 582.8 412 69.7
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 5.3e-164 581.6 445 64.9
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 5.3e-164 581.6 455 64.8
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 7.0e-164 581.3 443 65.0
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 9.1e-164 580.9 419 69.0
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.6e-163 580.1 440 65.2
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 7.7e-163 577.8 433 65.4
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 1.0e-162 577.4 423 65.7
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 2.2e-162 576.2 443 63.0
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 2.9e-162 575.9 438 63.2
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 3.8e-162 575.5 438 63.7
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 8.5e-162 574.3 412 68.0
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.2e-161 572.4 485 60.6
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 2.1e-160 569.7 412 68.0
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 2.1e-160 569.7 422 67.1
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.7e-160 568.5 468 63.0
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 8.0e-160 567.8 439 63.8
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 1.0e-159 567.4 433 66.3
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 5.2e-159 565.1 412 66.3
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 2.6e-158 562.8 450 64.2
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 7.5e-158 561.2 425 63.1
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.3e-157 560.5 412 66.0
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.7e-157 560.1 458 61.4
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 1.1e-156 557.4 422 66.4
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 4.1e-156 555.4 446 63.5
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 2.7e-155 552.7 421 63.7
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 7.7e-155 551.2 476 61.6
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.0e-154 550.8 430 62.8
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 1.0e-154 550.8 458 61.4
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 2.9e-154 549.3 412 66.3
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 3.8e-154 548.9 386 69.2
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 8.5e-154 547.7 444 63.7
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.1e-153 547.4 404 66.6
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.5e-153 546.2 445 62.7
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 3.2e-153 545.8 448 64.1
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 1.0e-151 540.8 415 65.5
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 2.3e-151 539.7 423 64.1
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 8.8e-151 537.7 478 59.0
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 8.8e-151 537.7 442 61.5
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 2.0e-150 536.6 420 63.8
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 7.5e-150 534.6 448 61.6
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 1.7e-149 533.5 488 57.0
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 9.2e-148 527.7 477 58.5
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 2.0e-147 526.6 427 63.2
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 3.8e-146 522.3 445 59.8
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 6.6e-146 521.5 466 58.2
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 2.5e-145 519.6 449 60.1
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 4.7e-144 515.4 462 56.9
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.8e-143 513.5 460 57.4
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 1.5e-142 510.4 577 49.4
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 1.5e-142 510.4 388 65.2
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.6e-142 509.6 457 58.9
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.4e-142 509.2 433 60.0
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 2.4e-140 503.1 419 58.0
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 8.6e-138 494.6 445 58.9
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.9e-137 493.4 477 56.0
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 5.8e-134 481.9 426 55.9
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 4.6e-131 472.2 376 62.2
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 2.3e-130 469.9 342 67.0
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 3.9e-130 469.2 342 67.8
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.1e-129 467.6 419 55.1
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 6.6e-122 441.8 437 54.5
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 8.1e-120 434.9 465 49.2
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.0e-118 430.3 431 53.6
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 3.8e-117 426.0 325 65.2
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 2.8e-112 409.8 342 61.1
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 2.6e-110 403.3 428 52.8
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 4.2e-100 369.4 324 58.3
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 6.0e-99 365.5 413 48.2
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 2.8e-96 356.7 279 64.5
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 5.5e-84 315.8 288 58.0
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 5.1e-82 309.3 299 50.5
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 1.2e-78 298.1 213 71.4
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.0e-77 295.0 208 70.2
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 6.5e-77 292.4 191 72.3
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 6.7e-74 282.3 187 71.7
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-67 261.2 242 57.4
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.5e-62 244.6 152 80.9
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 2.6e-57 227.3 168 66.7
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 3.2e-52 210.3 298 44.6
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.1e-47 195.3 189 58.2
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 6.3e-40 169.5 111 75.7
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 1.1e-39 168.7 255 39.2
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.0e-38 164.5 151 54.3
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 6.5e-37 159.5 122 63.1
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 8.6e-37 159.1 103 76.7
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 1.4e-34 151.8 122 62.3
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 1.4e-34 151.8 96 72.9
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 2.6e-33 147.5 96 76.0
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 1.3e-29 135.2 135 50.4
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 1.5e-28 131.7 236 34.7
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 2.5e-28 131.0 474 27.4
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 1.2e-27 128.6 294 34.7
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 7.5e-25 119.4 109 59.6
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 2.9e-16 90.9 475 24.6
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 4.1e-15 87.0 77 50.6
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.3e-13 82.0 166 38.6
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.3e-13 81.3 45 84.4
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 3.0e-13 80.9 46 73.9
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 5.6e-12 76.6 283 26.1
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.8e-11 74.3 37 91.9
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 7.5e-09 66.2 53 54.7
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 1.3e-08 65.5 53 54.7
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 3.7e-08 63.9 49 63.3
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 3.2e-07 60.8 31 87.1
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.4e-07 60.1 49 63.3
Sp3g32050 Schrenkiella parvula HOM05D002474 ORTHO05D006727 2.7e-06 57.8 26 92.3


User provided reference genes

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